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Ligand clusters for UniProt code Q9P371

Ligand clusters for Q9P371: AMSH-like protease sst2 from Schizosaccharomyces pombe (strain 972 / ATCC 24843)

Top 6 (of 26) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
3 ligand types
6 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
35 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4msjA  
JSmol
 

Structures

PDB   Schematic diagram
4msjA    
4nqlA    
4zfrA    
4zd5A    
4pqtA    
 more ...

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: DTT × 1
2,3-Dihydroxy-1,4-Dithiobutane
PDB code: 4msd(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4k1r(A).


 
3. Ligand: PO4 × 1
Phosphate ion
PDB code: 4msj(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 4zd4(A).


 
2. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 4msd(A), 4msj(A).


 
3. Ligand: PO4 × 2
Phosphate ion
PDB codes: 4msj(A), 4msm(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 1
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB code: 4ms7(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 11
PDB codes: 4jxe(A), 4k1r(A), 4ms7(A), 4msd(A), 4msj(A), 4msm(A), 4msq(A), 4zd4(A), 4zd5(A), 4zfr(A), 4zft(A).


 
2. Ligand: EDO × 24
1,2-Ethanediol
PDB codes: 4jxe(A), 4k1r(A), 4ms7(A), 4msd(A), 4msj(A), 4msq(A), 4nql(A), 4zd4(A), 4zd5(A), 4zfr(A), 4zft(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GLY × 1
glycine
PDB code: 4msj(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4jxe(A).

 

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