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EBI
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Structure Databases
PDBsum
Ligand clusters for UniProt code Q9HW02
Ligand clusters for Q9HW02: UDP-N-acetylmuramate--L-alanine ligase from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Top 6 (of 8) ligand clusters
Cluster 1.
3 ligand types
4 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 5vvwA
Structures
PDB
Schematic diagram
5vvw
A
6x9n
A
6x9f
A
Cluster 1 contains 3 ligand types
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6x9f
(A),
6x9n
(A).
2. Ligand:
UXP × 1
[(2r)-1-{4-[(5-Cyclopropyl-1h-Pyrazol-3-Yl)amino]-2h- Pyrazolo[3,4-D]pyrimidin-6-Yl}piperidin-2-
Yl]methanol
PDB code:
6x9f
(A).
3. Ligand:
UYD × 1
(2r)-2-({4-[(5-Tert-Butyl-1-Methyl-1h-Pyrazol-3-Yl) amino]-1h-Pyrazolo[3,4-D]pyrimidin-6-Yl}amino)-
2- Phenylethan-1-Ol
PDB code:
6x9n
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
5vvw
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6x9f
(A),
6x9n
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6x9f
(A),
6x9n
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6x9f
(A),
6x9n
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
6x9f
(A),
6x9n
(A).