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Ligand clusters for UniProt code Q9HTJ1

Ligand clusters for Q9HTJ1: NAD/NADP-dependent betaine aldehyde dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) GN=betB PE=1 SV=1

Top 6 (of 32) ligand clusters
Cluster 1.
11 ligand types
24 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
8 ligands
Cluster 5.
2 ligand types
6 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 2wmeA  
JSmol
 

Structures

PDB   Schematic diagram
2wmeA    
2xdrA    
2woxA    
3zqaA    
4cbbA    
 more ...

 

 Cluster 1 contains 11 ligand types

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Ligand Description


 
1. Ligand: GOL × 10
glycerin
Glycerol
PDB codes: 2wme(A), 2wox(A), 2xdr(A), 3zqa(A), 4caz(A), 4cbb(A).


 
2. Ligand: NDP × 3
Nadph dihydro-Nicotinamide-Adenine-Dinucleotide phosphate
PDB codes: 2wox(A), 2xdr(A), 3zqa(A).


 
3. Ligand: EDO × 2
1,2-Ethanediol
PDB codes: 3zqa(A), 4caz(A).


 
4. Ligand: PE4 × 2
2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]- Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethanol
PDB codes: 4caz(A), 4cbb(A).


 
5. Ligand: 7PE × 1
2-(2-(2-(2-(2-(2-Ethoxyethoxy)ethoxy)ethoxy)ethoxy) ethoxy)ethanol
PDB code: 2wox(A).


 
6. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 2wme(A).


 
7. Ligand: DTT × 1
2,3-Dihydroxy-1,4-Dithiobutane
PDB code: 4cbb(A).


 
8. Ligand: NAP × 1
Nadp nicotinamide-Adenine-Dinucleotide phosphate
PDB code: 2wme(A).


 
9. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 3zqa(A).


 
10. Ligand: TOE × 1
2-[2-(2-Methoxy-Ethoxy)-Ethoxy]-Ethoxyl
PDB code: 2xdr(A).


 
11. Ligand: TXE × 1
[[(2r,3s,4r,5r)-5-[(3r)-3-Aminocarbonyl-3,4- Dihydro-2h-Pyridin-1-Yl]-3,4-Bis(oxidanyl) oxolan-2-
Yl]methoxy-Oxidanidyl-Phosphoryl] [(2r, 3s,4r,5r)-5-(6-Aminopurin-9-Yl)-3,4- Bis(oxidanyl)oxolan-
2-Yl]methyl phosphate
PDB code: 4caz(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: 7PE × 1
2-(2-(2-(2-(2-(2-Ethoxyethoxy)ethoxy)ethoxy)ethoxy) ethoxy)ethanol
PDB code: 2wox(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4caz(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: PE4 × 1
2-{2-[2-(2-{2-[2-(2-Ethoxy-Ethoxy)-Ethoxy]- Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}-Ethanol
PDB code: 4cbb(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 7
glycerin
Glycerol
PDB codes: 2wme(A), 3zqa(A), 4caz(A), 4cbb(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6bjp(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 2wme(A), 4caz(A), 4cbb(A).


 
2. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 4caz(A),

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6bjp(A).


 
2. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 2wox(A).

 

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