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Ligand clusters for UniProt code Q9C0B1
Ligand clusters for Q9C0B1: Alpha-ketoglutarate-dependent dioxygenase FTO from Homo sapiens
4 ligand clusters
Cluster 1.
26 ligand types
53 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 4ie6A
Structures
PDB
Schematic diagram
4ie6
A
4qho
A
4ie5
A
4idz
A
6akw
A
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Cluster 1 contains 26 ligand types (of which only 20 are listed. Click
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Ligand
Description
_Zn
1. Metal:
_ZN × 8
PDB codes:
4ie0
(A),
4ie4
(A),
4ie5
(A),
4ie6
(A),
4ie7
(A),
4qho
(A),
6aej
(A),
6ak4
(A).
2. Ligand:
GOL × 5
glycerin
Glycerol
PDB codes:
4idz
(A),
4ie0
(A),
4ie4
(A),
4ie5
(A),
4qkn
(A).
_Mn
3. Metal:
_MN × 4
PDB codes:
4qkn
(A),
4zs2
(A),
4zs3
(A),
5zmd
(A).
4. Ligand:
FLU × 1
fluorescein
2-(6-Hydroxy-3-Oxo-3h-Xanthen-9-Yl)-Benzoic acid
PDB code:
4zs2
(A).
5. Ligand:
JMS × 1
meclofenamic acid
2-[(2,6-Dichloro-3-Methyl-Phenyl)amino]benzoic acid
PDB code:
4qkn
(A).
6. Ligand:
PD9 × 1
entacapone
(~{E})-2-Cyano-~{N},~{N}-Diethyl-3-[3-Nitro-4,5- Bis(oxidanyl)phenyl]prop-2-Enamide
PDB code:
6ak4
(A).
7. Ligand:
AKG × 5
2-Oxoglutaric acid
PDB codes:
4zs2
(A),
4zs3
(A),
5dab
(A),
5f8p
(A),
6akw
(A).
_Ni
8. Metal:
_NI × 5
PDB codes:
4cxw
(A),
4cxx
(A),
4cxy
(A),
4idz
(A).
9. Ligand:
OGA × 4
N-Oxalylglycine
PDB codes:
3lfm
(A),
4idz
(A),
4qkn
(A),
5zmd
(A).
Fe2
10. Metal:
FE2 × 3
PDB codes:
3lfm
(A),
5dab
(A),
5f8p
(A).
11. Ligand:
3DT × 1
3-Methylthymidine
PDB code:
3lfm
(A).
12. Ligand:
58W × 1
N-(5-Chloro-2,4-Dihydroxyphenyl)-1- Phenylcyclobutanecarboxamide
PDB code:
5dab
(A).
13. Ligand:
640 × 1
(2e)-4-{N'-[4-(4-Tert-Butyl-Benzyl)-Pyridine-3- Carbonyl]-Hydrazino}-4-Oxo-But-2-Enoic acid
PDB code:
4cxx
(A).
14. Ligand:
6MK × 1
(2e)-4-[N'-(4-Benzyl-Pyridine-3-Carbonyl)-Hydrazino]-4- Oxo-But-2-Enoic acid
PDB code:
4cxw
(A).
15. Ligand:
7YC × 1
(E)-3-[3-Nitro-4,5-Bis(oxidanyl)phenyl]-2-(1,3- Oxazinan-3-Ylcarbonyl)prop-2-Enenitrile
PDB code:
6aej
(A).
16. Ligand:
8S3 × 1
2-[[2,6-Bis(chloranyl)-4-(3,5-Dimethyl-1,2-Oxazol-4- Yl)phenyl]amino]benzoic acid
PDB code:
6akw
(A).
17. Ligand:
8XQ × 1
8-Hydroxyquinoline-5-Carboxylic acid
PDB code:
4ie4
(A).
18. Ligand:
A4F × 1
5-Amino-2-(6-Hydroxy-3-Oxo-3h-Xanthen-9-Yl)benzoic acid
PDB code:
4zs3
(A).
19. Ligand:
DGR × 1
(E)-4-(2-Nicotinoylhydrazinyl)-4-Oxobut-2-Enoic acid
PDB code:
4cxy
(A).
20. Ligand:
FIJ × 1
4-Chloranyl-6-[(2~{s})-6-Chloranyl-2,4,4-Trimethyl-7- Oxidanyl-3~{h}-Chromen-2-Yl]benzene-1,3-Diol
PDB code:
5f8p
(A).
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Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4ie5
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
5f8p
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Cl
1. Metal:
_CL × 1
PDB code:
5dab
(A).