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Ligand clusters for UniProt code Q9C0B1

Ligand clusters for Q9C0B1: Alpha-ketoglutarate-dependent dioxygenase FTO from Homo sapiens

4 ligand clusters
Cluster 1.
26 ligand types
53 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Representative protein: 4ie6A  
JSmol
 

Structures

PDB   Schematic diagram
4ie6A    
4qhoA    
4ie5A    
4idzA    
6akwA    
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 Cluster 1 contains 26 ligand types (of which only 20 are listed. Click for all)

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Ligand Description

_Zn
 
1. Metal: _ZN × 8
PDB codes: 4ie0(A), 4ie4(A), 4ie5(A), 4ie6(A), 4ie7(A), 4qho(A), 6aej(A), 6ak4(A).


 
2. Ligand: GOL × 5
glycerin
Glycerol
PDB codes: 4idz(A), 4ie0(A), 4ie4(A), 4ie5(A), 4qkn(A).

_Mn
 
3. Metal: _MN × 4
PDB codes: 4qkn(A), 4zs2(A), 4zs3(A), 5zmd(A).


 
4. Ligand: FLU × 1
fluorescein
2-(6-Hydroxy-3-Oxo-3h-Xanthen-9-Yl)-Benzoic acid
PDB code: 4zs2(A).


 
5. Ligand: JMS × 1
meclofenamic acid
2-[(2,6-Dichloro-3-Methyl-Phenyl)amino]benzoic acid
PDB code: 4qkn(A).


 
6. Ligand: PD9 × 1
entacapone
(~{E})-2-Cyano-~{N},~{N}-Diethyl-3-[3-Nitro-4,5- Bis(oxidanyl)phenyl]prop-2-Enamide
PDB code: 6ak4(A).


 
7. Ligand: AKG × 5
2-Oxoglutaric acid
PDB codes: 4zs2(A), 4zs3(A), 5dab(A), 5f8p(A), 6akw(A).

_Ni
 
8. Metal: _NI × 5
PDB codes: 4cxw(A), 4cxx(A), 4cxy(A), 4idz(A).


 
9. Ligand: OGA × 4
N-Oxalylglycine
PDB codes: 3lfm(A), 4idz(A), 4qkn(A), 5zmd(A).

Fe2
 
10. Metal: FE2 × 3
PDB codes: 3lfm(A), 5dab(A), 5f8p(A).


 
11. Ligand: 3DT × 1
3-Methylthymidine
PDB code: 3lfm(A).


 
12. Ligand: 58W × 1
N-(5-Chloro-2,4-Dihydroxyphenyl)-1- Phenylcyclobutanecarboxamide
PDB code: 5dab(A).


 
13. Ligand: 640 × 1
(2e)-4-{N'-[4-(4-Tert-Butyl-Benzyl)-Pyridine-3- Carbonyl]-Hydrazino}-4-Oxo-But-2-Enoic acid
PDB code: 4cxx(A).


 
14. Ligand: 6MK × 1
(2e)-4-[N'-(4-Benzyl-Pyridine-3-Carbonyl)-Hydrazino]-4- Oxo-But-2-Enoic acid
PDB code: 4cxw(A).


 
15. Ligand: 7YC × 1
(E)-3-[3-Nitro-4,5-Bis(oxidanyl)phenyl]-2-(1,3- Oxazinan-3-Ylcarbonyl)prop-2-Enenitrile
PDB code: 6aej(A).


 
16. Ligand: 8S3 × 1
2-[[2,6-Bis(chloranyl)-4-(3,5-Dimethyl-1,2-Oxazol-4- Yl)phenyl]amino]benzoic acid
PDB code: 6akw(A).


 
17. Ligand: 8XQ × 1
8-Hydroxyquinoline-5-Carboxylic acid
PDB code: 4ie4(A).


 
18. Ligand: A4F × 1
5-Amino-2-(6-Hydroxy-3-Oxo-3h-Xanthen-9-Yl)benzoic acid
PDB code: 4zs3(A).


 
19. Ligand: DGR × 1
(E)-4-(2-Nicotinoylhydrazinyl)-4-Oxobut-2-Enoic acid
PDB code: 4cxy(A).


 
20. Ligand: FIJ × 1
4-Chloranyl-6-[(2~{s})-6-Chloranyl-2,4,4-Trimethyl-7- Oxidanyl-3~{h}-Chromen-2-Yl]benzene-1,3-Diol
PDB code: 5f8p(A).

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 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4ie5(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 5f8p(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description

_Cl
 
1. Metal: _CL × 1
PDB code: 5dab(A).

 

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