Ligand clusters for UniProt code Q97UL5

Ligand clusters for Q97UL5: Diphosphomevalonate decarboxylase from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)

		5 ligand clusters Cluster 1. 4 ligand types 5 ligands Cluster 2. 1 ligand type 2 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 3 ligands
Representative protein: 5gmdA

Structures

PDB		Schematic diagram
5gmdA
4z7yA
4z7cA
5gmeA

Cluster 1 contains 4 ligand types

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Ligand		Description
		1. Ligand: DP6 × 2 (3r)-3-Hydroxy-5-{[(R)-Hydroxy(phosphonooxy) phosphoryl]oxy}-3-Methylpentanoic acid PDB codes: 5gmd(A), 5gme(A).
		2. Ligand: ADP × 1 Adenosine-5'-Diphosphate PDB code: 5gme(A).
		3. Ligand: AGS × 1 Phosphothiophosphoric acid-Adenylate ester PDB code: 5gmd(A).
		4. Ligand: PO4 × 1 Phosphate ion PDB code: 4z7c(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: AMP × 2 Adenosine monophosphate PDB codes: 5gmd(A), 5gme(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4z7c(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 5gmd(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: PO4 × 1 Phosphate ion PDB code: 4z7c(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 5gme(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 3 Sulfate ion PDB codes: 4z7y(A), 5gmd(A), 5gme(A).