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PDBsum entry 4z7y

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protein ligands Protein-protein interface(s) links
Lyase PDB id
4z7y

 

 

 

 

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Contents
Protein chains
(+ 0 more) 324 a.a.
Ligands
SO4 ×6
Waters ×81
PDB id:
4z7y
Name: Lyase
Title: Diphosphomevalonate decarboxylase from the sulfolobus solfataricus, space group p21
Structure: Diphosphomevalonate decarboxylase. Chain: a, b, c, d, e, f. Fragment: unp residues 2-325. Synonym: dmd. Engineered: yes
Source: Sulfolobus solfataricus (strain atcc 35092 / dsm 1617 / jcm 11322 / p2). Organism_taxid: 273057. Strain: atcc 35092 / dsm 1617 / jcm 11322 / p2. Gene: sso2989. Expressed in: escherichia coli. Expression_system_taxid: 562
Resolution:
2.70Å     R-factor:   0.255     R-free:   0.277
Authors: A.Hattori,H.Unno,H.Hemmi
Key ref: A.Hattori et al. (2015). In Vivo Formation of the Protein Disulfide Bond That Enhances the Thermostability of Diphosphomevalonate Decarboxylase, an Intracellular Enzyme from the Hyperthermophilic Archaeon Sulfolobus solfataricus. J Bacteriol, 197, 3463-3471. PubMed id: 26303832 DOI: 10.1128/JB.00352-15
Date:
08-Apr-15     Release date:   16-Sep-15    
PROCHECK
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 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q97UL5  (DMD_SULSO) -  Diphosphomevalonate decarboxylase from Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
Seq:
Struc:
325 a.a.
324 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.4.1.1.33  - diphosphomevalonate decarboxylase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]

      Pathway:
Terpenoid biosynthesis
      Reaction: (R)-5-diphosphomevalonate + ATP = isopentenyl diphosphate + ADP + phosphate + CO2
(R)-5-diphosphomevalonate
+ ATP
= isopentenyl diphosphate
+ ADP
+ phosphate
+ CO2
Molecule diagrams generated from .mol files obtained from the KEGG ftp site

 

 
    reference    
 
 
DOI no: 10.1128/JB.00352-15 J Bacteriol 197:3463-3471 (2015)
PubMed id: 26303832  
 
 
In Vivo Formation of the Protein Disulfide Bond That Enhances the Thermostability of Diphosphomevalonate Decarboxylase, an Intracellular Enzyme from the Hyperthermophilic Archaeon Sulfolobus solfataricus.
A.Hattori, H.Unno, S.Goda, K.Motoyama, T.Yoshimura, H.Hemmi.
 
  ABSTRACT  
 
No abstract given.

 

 

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