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Ligand clusters for UniProt code Q96EB6
Ligand clusters for Q96EB6: NAD-dependent protein deacetylase sirtuin-1 from Homo sapiens
6 ligand clusters
Cluster 1.
9 ligand types
17 ligands
Cluster 2.
2 ligand types
3 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
9 ligands
Representative protein: 5btrA
Structures
PDB
Schematic diagram
5btr
A
4zzh
A
4ig9
A
4kxq
A
4if6
A
more ...
Cluster 1 contains 9 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4kxq
(A),
4zzj
(A).
2. Ligand:
STL × 6
Resveratrol
PDB codes:
5btr
(A),
3. Ligand:
ACE-ARG-HIS-LYS-FDL × 2
ACE
=Acetyl group,
FDL
=N~6~-Acetyl-N-(4-Methyl-2-Oxo-2h-Chromen-7-Yl)-L- Lysinamide.
PDB codes:
5btr
(A),
4. Ligand:
APR × 2
Adenosine-5-Diphosphoribose
PDB codes:
4if6
(A),
4kxq
(A).
5. Ligand:
1NS × 1
4-(4-{2-[(Methylsulfonyl)amino]ethyl}piperidin-1-Yl) thieno[3,2-D]pyrimidine-6-Carboxamide
PDB code:
4zzi
(A).
6. Ligand:
4I5 × 1
(6s)-2-Chloro-5,6,7,8,9,10- Hexahydrocyclohepta[b]indole-6-Carboxamide
PDB code:
4i5i
(A).
7. Ligand:
ARG-HIS-LYS-ALY-LEU-NLE-PHE × 1
ALY
=N(6)-Acetyllysine,
NLE
=Norleucine.
PDB code:
4zzj
(A).
8. Ligand:
CNA × 1
Carba-Nicotinamide-Adenine-Dinucleotide
PDB code:
4zzj
(A).
9. Ligand:
NAD × 1
Nicotinamide-Adenine-Dinucleotide
PDB code:
4i5i
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
4TQ × 2
(3s)-1,3-Dimethyl-N-[3-(1,3-Oxazol-5-Yl)phenyl]-6-[3- (Trifluoromethyl)phenyl]-2,3-
Dihydropyrido[2,3- B]pyrazine-4(1h)-Carboxamide
PDB codes:
4zzi
(A),
4zzj
(A).
2. Ligand:
4TO × 1
(4s)-N-[3-(1,3-Oxazol-5-Yl)phenyl]-7-[3- (Trifluoromethyl)phenyl]-3,4-Dihydro-1,4-
Methanopyrido[2,3-B][1,4]diazepine-5(2h)-Carboxamide
PDB code:
4zzh
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACE-ARG-HIS-LYS-FDL × 2
ACE
=Acetyl group,
FDL
=N~6~-Acetyl-N-(4-Methyl-2-Oxo-2h-Chromen-7-Yl)-L- Lysinamide.
PDB codes:
5btr
(A),
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4zzj
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
BME × 1
Beta-Mercaptoethanol
PDB code:
4kxq
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Zn
1. Metal:
_ZN × 9
PDB codes:
4i5i
(A),
4if6
(A),
4ig9
(A),
4kxq
(A),
4zzh
(A),
4zzi
(A),
4zzj
(A),
5btr
(A),