Ligand clusters for UniProt code Q95460

Ligand clusters for Q95460: Major histocompatibility complex class I-related gene protein from Homo sapiens

		Top 6 (of 17) ligand clusters Cluster 1. 27 ligand types 60 ligands Cluster 2. 3 ligand types 6 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 4 ligands Cluster 5. 2 ligand types 2 ligands Cluster 6. 1 ligand type 2 ligands
Representative protein: 6pukA

Structures

PDB		Schematic diagram
6pukA
5u1rC
6w9uA
6pumA
5u72A
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Cluster 1 contains 27 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: GOL × 4 glycerin Glycerol PDB codes: 4pje(A), 4pjh(A), 5u16(A), 5u2v(A).
		2. Ligand: DIF × 1 diclofenac 2-[2,6-Dichlorophenyl)amino]benzeneacetic acid PDB code: 5u1r(C).
		3. Ligand: 2LJ × 18 1-Deoxy-1-({2,6-Dioxo-5-[(E)-(2-Oxopropylidene)amino]- 1,2,3,6-Tetrahydropyrimidin-4-Yl}amino)-D- Ribitol PDB codes: 4nqc(A), 4nqd(A), 4pj7(A), 4pj8(A), 4pj9(A), 4pja(A), 4pjb(A), 4pjc(A), 4pjd(A), 5d5m(A), 5d7j(C), 5d7l(A), 6mwr(A), 6puf(A), 6xqp(A),
		4. Ligand: 30W × 9 N-(6-Formyl-4-Oxo-3,4-Dihydropteridin-2-Yl)acetamide PDB codes: 4pj5(A), 4pje(A), 4pjf(A), 4pjg(A), 4pjh(A), 4pji(A), 4pjx(A), 5d7i(A).
		5. Ligand: 6FP × 3 2-Amino-4-Oxo-3,4-Dihydropteridine-6-Carbaldehyde PDB codes: 4gup(A), 4l4t(A),
		6. Ligand: 1VY × 2 1-Deoxy-1-(7-Hydroxy-6-Methyl-2,4-Dioxo-3,4- Dihydropteridin-8(2h)-Yl)-D-Ribitol PDB codes: 4l4v(A), 4lcw(A).
		7. Ligand: 2L4 × 2 1-Deoxy-1-({2,6-Dioxo-5-[(E)-(2-Oxoethylidene)amino]-1, 2,3,6-Tetrahydropyrimidin-4-Yl}amino)-D- Ribitol PDB codes: 4nqe(A),
		8. Ligand: B3P × 2 2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)- Propylamino]-2-Hydroxymethyl-Propane-1,3-Diol PDB codes: 4pjc(A), 4pjx(A).
		9. Ligand: 7WO × 1 2-Hydroxynaphthalene-1-Carbaldehyde PDB code: 5u16(A).
		10. Ligand: 7WP × 1 2,4-Diaminopteridine-6-Carbaldehyde PDB code: 5u17(A).
		11. Ligand: 7WQ × 1 2-Hydroxy-5-Methoxybenzaldehyde PDB code: 5u2v(A).
		12. Ligand: 7ZS × 1 3-Methanoyl-2-Oxidanyl-Benzoic acid PDB code: 5u6q(C).
		13. Ligand: ACT × 1 Acetate ion PDB code: 5u6q(C).
		14. Ligand: N18 × 1 Methyl n-(2,6-Dioxo-1,2,3,6-Tetrahydropyrimidine-4- Carbonyl)-Beta-Alaninate PDB code: 6pvd(A).
		15. Ligand: OYD × 1 6-[(5-Hydroxypentyl)amino]-5-[(E)- Propylideneamino]pyrimidine-2,4(1h,3h)-Dione PDB code: 6pud(A).
		16. Ligand: OYG × 1 6-Methyl-5-[(1e)-3-Oxobut-1-En-1-Yl]pyrimidine-2,4(1h, 3h)-Dione PDB code: 6puh(A).
		17. Ligand: OYV × 1 1,2-Dideoxy-1-{2,6-Dioxo-5-[(1e)-3-Oxobut-1-En-1-Yl]-1, 2,3,6-Tetrahydropyrimidin-4-Yl}-D-Ribo- Hexitol PDB code: 6puk(A).
		18. Ligand: OZD × 1 6-[(2-Hydroxyethyl)amino]-5-[(E)-(2-Oxopropylidene) amino]pyrimidine-2,4(1h,3h)-Dione PDB code: 6pug(A).
		19. Ligand: P1J × 1 N-(2,6-Dioxo-1,2,3,6-Tetrahydropyrimidine-4-Carbonyl)- Beta-Alanine PDB code: 6pvc(A).
		20. Ligand: PO4 × 1 Phosphate ion PDB code: 4gup(A).
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Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 5d7i(A), 5u17(A), 5u6q(C).
		2. Ligand: ACT × 2 Acetate ion PDB codes: 5u1r(C), 5u72(A).
_Cl		3. Metal: _CL × 1 PDB code: 4pje(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 4pj9(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 5u72(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 3 glycerin Glycerol PDB codes: 4pjb(A), 5d7i(A), 5d7j(C).
		2. Ligand: ACT × 1 Acetate ion PDB code: 5d5m(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 6puf(A).
		2. Ligand: ACT × 1 Acetate ion PDB code: 6w9v(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: PRO × 2 PDB codes: 5d7i(A), 5u2v(A).