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Ligand clusters for UniProt code Q93LD7

Ligand clusters for Q93LD7: Phosphotriesterase from Rhizobium radiobacter

2 ligand clusters
Cluster 1.
13 ligand types
65 ligands
Cluster 2.
1 ligand type
1 ligand
Representative protein: 2d2gA  
JSmol
 

Structures

PDB   Schematic diagram
2d2gA    
2d2jA    
2r1kA    
2r1nA    
2r1mA    
 more ...

 

 Cluster 1 contains 13 ligand types

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Ligand Description

_Zn
 
1. Metal: _ZN × 2
PDB codes: 5w7h(A),

__F
 
2. Metal: __F × 1
PDB code: 5vej(A).

_Co
 
3. Metal: _CO × 28
PDB codes: 2d2g(A), 2d2h(A), 2d2j(A), 2r1k(A), 2r1l(A), 2r1m(A), 2r1n(A), 2r1p(A), 3a3w(A), 3a3x(A), 3a4j(A), 3c86(A), 3ood(A), 3oqe(A), 3so7(A), 3wml(A), 4np7(A), 5vej(A),


 
4. Ligand: EDO × 12
1,2-Ethanediol
PDB codes: 2d2j(A), 2r1k(A), 2r1l(A), 2r1m(A), 2r1p(A), 3a4j(A), 3c86(A), 3oqe(A), 3wml(A), 4np7(A).

Fe2
 
5. Metal: FE2 × 8
PDB codes: 2r1k(A), 2r1l(A), 2r1m(A), 2r1n(A), 2r1p(A), 3c86(A), 3wml(A), 4np7(A).


 
6. Ligand: DPJ × 4
O,O-Diethyl hydrogen thiophosphate
PDB codes: 2r1l(A), 2r1p(A), 3c86(A), 4np7(A).


 
7. Ligand: EPL × 3
Diethyl 4-Methoxyphenyl phosphate
PDB codes: 2r1n(A), 3a3w(A), 3ood(A).


 
8. Ligand: DPF × 2
Diethyl hydrogen phosphate
PDB codes: 2r1k(A), 2r1m(A).


 
9. Ligand: ACT × 1
Acetate ion
PDB code: 5vej(A).


 
10. Ligand: DZZ × 1
O,O-Dimethyl hydrogen thiophosphate
PDB code: 2d2g(A).


 
11. Ligand: PO4 × 1
Phosphate ion
PDB code: 3so7(A).


 
12. Ligand: TZZ × 1
Trimethyl phosphate
PDB code: 2d2h(A).

_Na
 
13. Metal: _NA × 1
PDB code: 3so7(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 5vej(A).

 

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