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EBI
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Ligand clusters for UniProt code Q93LD7
Ligand clusters for Q93LD7: Phosphotriesterase from Rhizobium radiobacter
2 ligand clusters
Cluster 1.
13 ligand types
65 ligands
Cluster 2.
1 ligand type
1 ligand
Representative protein: 2d2gA
Structures
PDB
Schematic diagram
2d2g
A
2d2j
A
2r1k
A
2r1n
A
2r1m
A
more ...
Cluster 1 contains 13 ligand types
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Ligand
Description
_Zn
1. Metal:
_ZN × 2
PDB codes:
5w7h
(A),
__F
2. Metal:
__F × 1
PDB code:
5vej
(A).
_Co
3. Metal:
_CO × 28
PDB codes:
2d2g
(A),
2d2h
(A),
2d2j
(A),
2r1k
(A),
2r1l
(A),
2r1m
(A),
2r1n
(A),
2r1p
(A),
3a3w
(A),
3a3x
(A),
3a4j
(A),
3c86
(A),
3ood
(A),
3oqe
(A),
3so7
(A),
3wml
(A),
4np7
(A),
5vej
(A),
4. Ligand:
EDO × 12
1,2-Ethanediol
PDB codes:
2d2j
(A),
2r1k
(A),
2r1l
(A),
2r1m
(A),
2r1p
(A),
3a4j
(A),
3c86
(A),
3oqe
(A),
3wml
(A),
4np7
(A).
Fe2
5. Metal:
FE2 × 8
PDB codes:
2r1k
(A),
2r1l
(A),
2r1m
(A),
2r1n
(A),
2r1p
(A),
3c86
(A),
3wml
(A),
4np7
(A).
6. Ligand:
DPJ × 4
O,O-Diethyl hydrogen thiophosphate
PDB codes:
2r1l
(A),
2r1p
(A),
3c86
(A),
4np7
(A).
7. Ligand:
EPL × 3
Diethyl 4-Methoxyphenyl phosphate
PDB codes:
2r1n
(A),
3a3w
(A),
3ood
(A).
8. Ligand:
DPF × 2
Diethyl hydrogen phosphate
PDB codes:
2r1k
(A),
2r1m
(A).
9. Ligand:
ACT × 1
Acetate ion
PDB code:
5vej
(A).
10. Ligand:
DZZ × 1
O,O-Dimethyl hydrogen thiophosphate
PDB code:
2d2g
(A).
11. Ligand:
PO4 × 1
Phosphate ion
PDB code:
3so7
(A).
12. Ligand:
TZZ × 1
Trimethyl phosphate
PDB code:
2d2h
(A).
_Na
13. Metal:
_NA × 1
PDB code:
3so7
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
5vej
(A).