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Ligand clusters for UniProt code Q8X1D8

Ligand clusters for Q8X1D8: Nitroalkane oxidase from Fusarium oxysporum

Top 6 (of 9) ligand clusters
Cluster 1.
6 ligand types
13 ligands
Cluster 2.
3 ligand types
9 ligands
Cluster 3.
3 ligand types
9 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3d9dA  
JSmol
 

Structures

PDB   Schematic diagram
3d9dA    
2rehA    
3d9fA    
2zafA    
2c12A    
 more ...

 

 Cluster 1 contains 6 ligand types

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Ligand Description


 
1. Ligand: FAD × 7
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 2c12(A), 2reh(A), 2zaf(A), 3d9d(A), 3d9e(A), 3d9f(A), 3fcj(A).


 
2. Ligand: N6C × 2
1-Nitrohexane
PDB codes: 3d9d(A), 3d9f(A).


 
3. Ligand: FAD-CNX × 1
FAD=Flavin-Adenine dinucleotide, CNX=Heptanenitrile.
PDB code: 3d9g(A).


 
4. Ligand: FAD-NBT × 1
FAD=Flavin-Adenine dinucleotide, NBT=(2s)-2-Nitrobutane.
PDB code: 2c0u(A).


 
5. Ligand: N8C × 1
1-Nitrooctane
PDB code: 3d9e(A).


 
6. Ligand: NIE × 1
Nitroethane
PDB code: 3fcj(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: FAD × 7
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 2c12(A), 2reh(A), 2zaf(A), 3d9d(A), 3d9e(A), 3d9f(A), 3fcj(A).


 
2. Ligand: FAD-CNX × 1
FAD=Flavin-Adenine dinucleotide, CNX=Heptanenitrile.
PDB code: 3d9g(A).


 
3. Ligand: FAD-NBT × 1
FAD=Flavin-Adenine dinucleotide, NBT=(2s)-2-Nitrobutane.
PDB code: 2c0u(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: FAD × 7
flavin adenine dinucleotide
Flavin-Adenine dinucleotide
PDB codes: 2c12(A), 2reh(A), 2zaf(A), 3d9d(A), 3d9e(A), 3d9f(A), 3fcj(A).


 
2. Ligand: FAD-CNX × 1
FAD=Flavin-Adenine dinucleotide, CNX=Heptanenitrile.
PDB code: 3d9g(A).


 
3. Ligand: FAD-NBT × 1
FAD=Flavin-Adenine dinucleotide, NBT=(2s)-2-Nitrobutane.
PDB code: 2c0u(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2c12(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2c12(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2c12(A).

 

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