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Ligand clusters for UniProt code Q72GM3

Ligand clusters for Q72GM3: Leucine--tRNA ligase from Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)

Top 6 (of 11) ligand clusters
Cluster 1.
3 ligand types
3 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1obcA  
JSmol
 

Structures

PDB   Schematic diagram
1obcA    
1obhA    

 

 Cluster 1 contains 3 ligand types

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Ligand Description


 
1. Ligand: LEU × 1
PDB code: 1obc(A).


 
2. Ligand: LMS × 1
[(2r,3s,4r,5r)-5-(6-Amino-9h-Purin-9-Yl)-3,4- Dihydroxytetrahydro-2-Furanyl]methyl sulfamate
PDB code: 1obc(A).


 
3. Ligand: NVA-LMS × 1
NVA=Norvaline, LMS=[(2r,3s,4r,5r)-5-(6-Amino-9h-Purin-9-Yl)-3,4- Dihydroxytetrahydro-2-Furanyl]methyl sulfamate.
PDB code: 1obh(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: NVA-2AD × 1
NVA=Norvaline, 2AD=2'-Amino-2'-Deoxyadenosine.
PDB code: 1obc(A).


 
2. Ligand: NVA-LMS × 1
NVA=Norvaline, LMS=[(2r,3s,4r,5r)-5-(6-Amino-9h-Purin-9-Yl)-3,4- Dihydroxytetrahydro-2-Furanyl]methyl sulfamate.
PDB code: 1obh(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1obh(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1obh(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1obh(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: SO4 × 1
Sulfate ion
PDB code: 1obh(A).

 

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