Ligand clusters for UniProt code Q6ZZJ1

Ligand clusters for Q6ZZJ1: LmbE family N-acetylglucosaminyl deacetylase from Actinoplanes teichomyceticus

		5 ligand clusters Cluster 1. 10 ligand types 15 ligands Cluster 2. 2 ligand types 2 ligands Cluster 3. 2 ligand types 2 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand
Representative protein: 3dffA

Structures

PDB		Schematic diagram
3dffA
3dfkA
2xadA
2x9lA
3dfmA
		more ...

Cluster 1 contains 10 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 5 PDB codes: 2x9l(A), 3dff(A), 3dfk(A), 3dfm(A),
		2. Ligand: NAG × 1 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB code: 2xad(A).
		3. Ligand: SO4 × 2 Sulfate ion PDB codes: 3dfm(A),
		4. Ligand: BOG × 1 Octyl beta-D-Glucopyranoside PDB code: 2x9l(A).
		5. Ligand: DKA × 1 Decanoic acid PDB code: 3dfk(A).
		6. Ligand: GCS-T55 × 1 GCS=2-Amino-2-Deoxy-Beta-D-Glucopyranose, T55=8-Methylnonanoic acid. PDB code: 2xad(A).
		7. Ligand: GHP-3MY-3FG-GHP-GHP-OMY-3FG × 1 GHP=(2r)-Amino(4-Hydroxyphenyl)ethanoic acid, 3MY=3-Chloro-D-Tyrosine, 3FG=(2s)-Amino(3,5-Dihydroxyphenyl)ethanoic acid, OMY=(Betar)-3-Chloro-Beta-Hydroxy-L-Tyrosine. PDB code: 2xad(A).
		8. Ligand: IMD × 1 Imidazole PDB code: 6iiy(A).
		9. Ligand: PG4 × 1 Tetraethylene glycol PDB code: 3dff(A).
_Co		10. Metal: _CO × 1 PDB code: 6iiy(A).

Cluster 2 contains 2 ligand types

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Ligand		Description
		1. Ligand: BMA × 1 Beta-D-Mannopyranose PDB code: 2xad(A).
		2. Ligand: GHP-3MY-3FG-GHP-GHP-OMY-3FG × 1 GHP=(2r)-Amino(4-Hydroxyphenyl)ethanoic acid, 3MY=3-Chloro-D-Tyrosine, 3FG=(2s)-Amino(3,5-Dihydroxyphenyl)ethanoic acid, OMY=(Betar)-3-Chloro-Beta-Hydroxy-L-Tyrosine. PDB code: 2xad(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3dff(A).
_Zn		2. Metal: _ZN × 1 PDB code: 3dfm(A).

Cluster 4 contains 1 ligand type

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Ligand		Description
_Zn		1. Metal: _ZN × 1 PDB code: 3dfm(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Zn		1. Metal: _ZN × 1 PDB code: 3dfm(A).