Ligand clusters for UniProt code Q6XV27

Ligand clusters for Q6XV27: Neuraminidase from Influenza A virus (strain A/Duck/England/1/1956 H11N6)

		Top 6 (of 14) ligand clusters Cluster 1. 9 ligand types 24 ligands Cluster 2. 4 ligand types 5 ligands Cluster 3. 5 ligand types 7 ligands Cluster 4. 4 ligand types 16 ligands Cluster 5. 2 ligand types 4 ligands Cluster 6. 2 ligand types 8 ligands
Representative protein: 1v0zA

Structures

PDB		Schematic diagram
1v0zA
6hfyA
1w1xA
6hgbA
2cmlA
		more ...

Cluster 1 contains 9 ligand types

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Ligand		Description
		1. Ligand: NAG × 3 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 1v0z(A), 2cml(A),
		2. Ligand: MAN × 9 Alpha-D-Mannopyranose PDB codes: 1v0z(A), 1w1x(A), 1w20(A), 1w21(A),
		3. Ligand: BMA × 3 Beta-D-Mannopyranose PDB codes: 1w20(A), 1w21(A), 2cml(A).
		4. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1w1x(A), 1w20(A), 1w21(A).
		5. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 6hg5(A), 6hgb(A).
		6. Ligand: BMA-MAN-MAN × 1 BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 1w1x(A).
		7. Ligand: MAN-MAN-MAN × 1 MAN=Alpha-D-Mannopyranose. PDB code: 2cml(A).
		8. Ligand: NAG-BMA-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 1v0z(A).
		9. Ligand: NAG-NAG-BMA-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6hfy(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN × 2 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB codes: 6hfy(A), 6hg5(A).
		2. Ligand: NAG-NAG-BMA-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, MAN=Alpha-D-Mannopyranose, BMA=Beta-D-Mannopyranose. PDB code: 2cml(A).
		3. Ligand: NAG-NAG-BMA-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 1v0z(A).
		4. Ligand: NAG-NAG-BMA-MAN-MAN-MAN-MAN-MAN × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, BMA=Beta-D-Mannopyranose, MAN=Alpha-D-Mannopyranose. PDB code: 6hgb(A).

Cluster 3 contains 5 ligand types

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Ligand		Description
		1. Ligand: SIA × 3 N-Acetyl-Alpha-Neuraminic acid PDB codes: 1w1x(A), 1w20(A), 1w21(A).
		2. Ligand: GOL × 1 glycerin Glycerol PDB code: 6hgb(A).
		3. Ligand: ZMR × 1 zanamivir Zanamivir PDB code: 2cml(A).
		4. Ligand: DAN × 1 2-Deoxy-2,3-Dehydro-N-Acetyl-Neuraminic acid PDB code: 6hfy(A).
		5. Ligand: G39 × 1 (3r,4r,5s)-4-(Acetylamino)-5-Amino-3-(Pentan-3-Yloxy) cyclohex-1-Ene-1-Carboxylic acid PDB code: 6hg5(A).

Cluster 4 contains 4 ligand types

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Ligand		Description
		1. Ligand: GOL × 7 glycerin Glycerol PDB codes: 1v0z(A), 1w1x(A), 1w20(A), 1w21(A), 6hfy(A), 6hg5(A), 6hgb(A).
		2. Ligand: NAG × 5 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 1v0z(A), 1w1x(A), 1w20(A), 1w21(A), 2cml(A).
		3. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 6hfy(A), 6hg5(A), 6hgb(A).
		4. Ligand: PO4 × 1 Phosphate ion PDB code: 6hgb(A).

Cluster 5 contains 2 ligand types

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Ligand		Description
		1. Ligand: SIA × 3 N-Acetyl-Alpha-Neuraminic acid PDB codes: 1w1x(A), 1w20(A), 1w21(A).
		2. Ligand: ZMR × 1 zanamivir Zanamivir PDB code: 2cml(A).

Cluster 6 contains 2 ligand types

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Ligand		Description
		1. Ligand: NAG × 5 n-acetylglucosamine 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose PDB codes: 1w1x(A), 1w20(A), 1w21(A), 6hfy(A), 6hg5(A).
		2. Ligand: NAG-NAG × 3 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose. PDB codes: 1v0z(A), 2cml(A), 6hgb(A).