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Ligand clusters for UniProt code Q64610

Ligand clusters for Q64610: Ectonucleotide pyrophosphatase/phosphodiesterase family member 2 from Rattus norvegicus

Top 6 (of 30) ligand clusters


Cluster 1. 14 ligand types 50 ligands		Cluster 2. 6 ligand types 16 ligands		Cluster 3. 1 ligand type 1 ligand		Cluster 4. 2 ligand types 5 ligands		Cluster 5. 1 ligand type 1 ligand		Cluster 6. 1 ligand type 1 ligand

Representative protein: 5dltA

Structures

PDB		Schematic diagram

5dltA
2xrgA
5ijqA
2xr9A
5ijsA
		more ...

Cluster 1 contains 14 ligand types

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Ligand

Description

_Zn

1. Metal: _ZN × 30

PDB codes: 2xr9(A), 2xrg(A), 5dlt(A), 5dlv(A), 5dlw(A), 5ijq(A), 5ijs(A), 5l0b(A), 5l0e(A), 5l0k(A), 5lqq(A), 5m0d(A), 5m0e(A), 5m0m(A), 5m0s(A),

2. Ligand: 5JK × 4

7alpha-Hydroxycholesterol

PDB codes: 5dlt(A), 5ijq(A), 5ijs(A), 5m0e(A).

3. Ligand: PO4 × 3

Phosphate ion

PDB codes: 2xr9(A), 5dlv(A), 5ijq(A).

4. Ligand: 5D5 × 2

2-{[(3alpha,5beta,7alpha,8alpha,14beta,17alpha)-3,7- Dihydroxy-24-Oxocholan-24-
Yl]amino}ethanesulfonic acid

PDB codes: 5dlv(A), 5dlw(A).

5. Ligand: NKP × 2

(2r)-2-Hydroxy-3-(Phosphonooxy)propyl (9e)-Octadec-9- Enoate

PDB codes: 5dlw(A), 5m0m(A).

6. Ligand: 6ZM × 1

1-{2-[(2,3-Dihydro-1h-Inden-2-Yl)amino]-7,8- Dihydropyrido[4,3-D]pyrimidin-6(5h)-Yl}ethan-1-One

PDB code: 5l0b(A).

7. Ligand: 6ZN × 1

6-(3-{2-[(2,3-Dihydro-1h-Inden-2-Yl)amino]-7,8- Dihydropyrido[4,3-D]pyrimidin-6(5h)-Yl}propanoyl)-
1,3- Benzoxazol-2(3h)-One

PDB code: 5l0e(A).

8. Ligand: 6ZO × 1

(3,5-Dichlorophenyl)methyl 4-[3-Oxo-3-(2-Oxo-2,3- Dihydro-1,3-Benzoxazol-6-Yl)propyl]piperazine-1-
Carboxylate

PDB code: 5l0k(A).

9. Ligand: 72P × 1

3-(6-Chloranyl-2-Methyl-1-Phenyl-Indol-3-Yl) sulfanylbenzoic acid

PDB code: 5lqq(A).

10. Ligand: 7C8 × 1

[3,5-Bis(chloranyl)phenyl]methyl 4-[(4~{r})-4-
[(3~{r}, 5~{s},7~{s},8~{r},9~{s},10~{s},13~{r},14~{s},17~{r})- 10,13-Dimethyl-3,7-Bis(oxidanyl)-
2,3,4,5,6,7,8,9,11, 12,14,15,16,17-Tetradecahydro-1~{h}- Cyclopenta[a]phenanthren-17-
Yl]pentyl]piperazine-1- Carboxylate

PDB code: 5m0d(A).

11. Ligand: 7CF × 1

[3,5-Bis(chloranyl)phenyl]methyl (3~{r})-3-[[(4~{r})-4-
[(3~{r},5~{s},7~{s},8~{r},9~{s},10~{s},13~{r},14~{s}, 17~{r})-10,13-Dimethyl-3,7-Bis(oxidanyl)-
2,3,4,5,6,7, 8,9,11,12,14,15,16,17-Tetradecahydro-1~{h}- Cyclopenta[a]phenanthren-17-
Yl]pentanoyl]amino]pyrrolidine-1-Carboxylate

PDB code: 5m0m(A).

12. Ligand: 7CR × 1

[3,5-Bis(chloranyl)phenyl]methyl 4-[(3~{r})-3-Oxidanyl- 3-(2-Oxidanylidene-3~{h}-1,3-Benzoxazol-6-
Yl) propyl]piperazine-1-Carboxylate

PDB code: 5m0e(A).

13. Ligand: 7CW × 1

[3,5-Bis(chloranyl)phenyl]methyl ~{n}-[2-[[(4~{r})-4-
[(3~{r},5~{s},7~{s},8~{r},9~{s},10~{s},13~{r},14~{s}, 17~{r})-10,13-Dimethyl-3,7-Bis(oxidanyl)-
2,3,4,5,6,7, 8,9,11,12,14,15,16,17-Tetradecahydro-1~{h}- Cyclopenta[a]phenanthren-17-
Yl]pentanoyl]amino]ethyl]carbamate

PDB code: 5m0s(A).