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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q5SLR4
Ligand clusters for Q5SLR4: 2-oxoisovalerate dehydrogenase subunit alpha from Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
1 ligand cluster
Cluster 1.
5 ligand types
8 ligands
Representative protein: 1umbA
Structures
PDB
Schematic diagram
1umb
A
1umc
A
1umd
A
1um9
A
Cluster 1 contains 5 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 3
PDB codes:
1umb
(A),
1umc
(A),
1umd
(A).
2. Ligand:
TDP × 2
cocarboxylase
Thiamin diphosphate
PDB codes:
1umb
(A),
1umc
(A).
3. Ligand:
4MV × 1
4-Methyl valeric acid
PDB code:
1umc
(A).
4. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1um9
(A).
5. Ligand:
TDP-COI × 1
TDP
=Thiamin diphosphate,
COI
=2-Oxo-4-Methylpentanoic acid.
PDB code:
1umd
(A).