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EBI
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Ligand clusters for UniProt code Q4WP27
Ligand clusters for Q4WP27: CaaX farnesyltransferase alpha subunit Ram2 from Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
6 ligand clusters
Cluster 1.
5 ligand types
9 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
8 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4lnbA
Structures
PDB
Schematic diagram
4lnb
A
4mbg
A
4lng
A
4l9p
A
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
EDO × 4
1,2-Ethanediol
PDB codes:
4lnb
(A),
4lng
(A),
2. Ligand:
FPP × 2
Farnesyl diphosphate
PDB codes:
4lng
(A),
4mbg
(A).
3. Ligand:
ED5 × 1
Tert-Butyl 4-({(2-{(4-Cyanophenyl)[(1-Methyl-1h- Imidazol-5-Yl)methyl]amino}ethyl)[(2-
Methylphenyl) sulfonyl]amino}methyl)piperidine-1-Carboxylate
PDB code:
4lnb
(A).
4. Ligand:
FII × 1
[(3,7,11-Trimethyl-Dodeca-2,6,10-Trienyloxycarbamoyl)- Methyl]-Phosphonic acid
PDB code:
4l9p
(A).
5. Ligand:
LYS-CYS-VAL-VAL-MET × 1
PDB code:
4l9p
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4l9p
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 8
1,2-Ethanediol
PDB codes:
4l9p
(A),
4lnb
(A),
4lng
(A),
4mbg
(A),
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4l9p
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 2
1,2-Ethanediol
PDB codes:
4l9p
(A),
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4mbg
(A).