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EBI
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PDBsum
Ligand clusters for UniProt code Q46925
Ligand clusters for Q46925: Cysteine desulfurase CsdA from Escherichia coli (strain K12)
Top 6 (of 27) ligand clusters
Cluster 1.
5 ligand types
12 ligands
Cluster 2.
4 ligand types
8 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5ft5A
Structures
PDB
Schematic diagram
5ft5
A
5ft4
A
5ft6
A
4lw2
A
4lw4
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
PLP × 6
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes:
4lw2
(A),
4lw4
(A),
5ft4
(A),
5ft5
(A),
5ft6
(A),
5ft8
(A).
2. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
4lw2
(A),
5ft5
(A),
5ft6
(A).
3. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
5ft4
(A).
4. Ligand:
CSS × 1
S-Mercaptocysteine
PDB code:
5ft8
(A).
5. Ligand:
TLA × 1
L(+)-Tartaric acid
PDB code:
5ft5
(A).
Cluster 2 contains 4 ligand types
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Ligand
Description
1. Ligand:
PLP × 5
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes:
4lw4
(A),
5ft4
(A),
5ft5
(A),
5ft6
(A),
5ft8
(A).
2. Ligand:
CIT × 1
citric acid
Citric acid
PDB code:
5ft4
(A).
3. Ligand:
CSS × 1
S-Mercaptocysteine
PDB code:
5ft8
(A).
4. Ligand:
TLA × 1
L(+)-Tartaric acid
PDB code:
5ft5
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5ft4
(A).
2. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5ft8
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
5ft5
(A),
5ft6
(A).
2. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5ft8
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5ft5
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
PEG × 1
Di(hydroxyethyl)ether
PDB code:
5ft6
(A).