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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q44238
Ligand clusters for Q44238: Xaa-Pro dipeptidase from Alteromonas sp.
Top 6 (of 8) ligand clusters
Cluster 1.
3 ligand types
14 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4zwuA
Structures
PDB
Schematic diagram
4zwu
A
4zwo
A
3l7g
A
3l24
A
4zwp
A
Cluster 1 contains 3 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 10
PDB codes:
3l24
(A),
3l7g
(A),
4zwo
(A),
4zwp
(A),
4zwu
(A),
2. Ligand:
GOA × 2
glycolic acid
Glycolic acid
PDB codes:
3l24
(A),
4zwo
(A).
3. Ligand:
M44 × 2
N,N'-Bis(1-Methylethyl)phosphorodiamidic acid
PDB codes:
3l7g
(A),
4zwp
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
_Mn
1. Metal:
_MN × 1
PDB code:
4zwo
(A).
_Ba
2. Metal:
_BA × 1
PDB code:
4zwp
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 2
PDB codes:
3l24
(A),
3l7g
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 1
PDB code:
3l7g
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 1
PDB code:
4zwo
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
_Mn
1. Metal:
_MN × 1
PDB code:
4zwo
(A).