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Ligand clusters for UniProt code Q1LCS4

Ligand clusters for Q1LCS4: 3-hydroxyanthranilate 3,4-dioxygenase from Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)

3 ligand clusters
Cluster 1.
14 ligand types
42 ligands
Cluster 2.
1 ligand type
20 ligands
Cluster 3.
2 ligand types
22 ligands
Representative protein: 6vibA  
JSmol
 

Structures

PDB   Schematic diagram
6vibA    
4i3pA    
4l2nA    
1yfuA    
4wzcA    
 more ...

 

 Cluster 1 contains 14 ligand types

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Ligand Description


 
1. Ligand: 3HA × 1
3-Hydroxyanthranilic acid
PDB code: 1yfy(A).

_Fe
 
2. Metal: _FE × 4
PDB codes: 1yfu(A), 1yfw(A), 1yfy(A), 4hvr(A).


 
3. Ligand: SAL × 1
salicylic acid
2-Hydroxybenzoic acid
PDB code: 4hvr(A).


 
4. Ligand: 4AA × 1
4-Chloro-3-Hydroxyanthranilic acid
PDB code: 1yfw(A).

Fe2
 
5. Metal: FE2 × 18
PDB codes: 4hsj(A), 4hsl(A), 4hvq(A), 4i3p(A), 4l2n(A), 4r52(A), 4wzc(A), 5v26(A), 5v27(A), 5v28(A), 6bvp(A), 6bvq(A), 6bvr(A), 6bvs(A), 6cd3(A), 6d60(A), 6d61(A), 6d62(A).


 
6. Ligand: 3HA × 5
3-Hydroxyanthranilic acid
PDB codes: 4hsl(A), 6cd3(A), 6d62(A), 6vi6(A), 6vi7(A).


 
7. Ligand: 4AA × 3
4-Chloro-3-Hydroxyanthranilic acid
PDB codes: 6bvq(A), 6bvs(A), 6d61(A).


 
8. Ligand: 2FO × 2
(2z,3z)-2-[(2z)-3-Hydroxyprop-2-En-1-Ylidene]-3- Iminobutanedioic acid
PDB codes: 6vib(A), 6x11(A).

_Cl
 
9. Metal: _CL × 2
PDB codes: 1yfu(A), 4l2n(A).


 
10. Ligand: 1CW × 1
3-Amino-2-Hydroxybenzoic acid
PDB code: 4i3p(A).


 
11. Ligand: 1UC × 1
(2e)-2-Amino-3-[(1e)-3-Oxoprop-1-En-1-Yl]but-2-Enedioic acid
PDB code: 4wzc(A).


 
12. Ligand: 6PC × 1
Pyridine-2-Carboxylic acid
PDB code: 4hsj(A).


 
13. Ligand: QXM × 1
(5r,6z)-5-(Hydroperoxy-Kappao)-5-(Hydroxy-Kappao)-6- Iminocyclohexa-1,3-Diene-1-Carboxylato(2-)Iron
PDB code: 6vi9(A).

_Cu
 
14. Metal: _CU × 1
PDB code: 4hvo(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: TRS × 20
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes: 1yfu(A), 1yfw(A), 1yfy(A), 4l2n(A), 4r52(A), 5v27(A), 5v28(A), 6bvp(A), 6bvq(A), 6bvr(A), 6bvs(A), 6d60(A), 6d61(A), 6d62(A), 6vi5(A), 6vi6(A), 6vi7(A), 6vi9(A), 6vib(A), 6x11(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description

_Fe
 
1. Metal: _FE × 4
PDB codes: 1yfu(A), 1yfw(A), 1yfy(A), 4hvr(A).

Fe2
 
2. Metal: FE2 × 18
PDB codes: 4hsj(A), 4hsl(A), 4hvo(A), 4i3p(A), 4l2n(A), 4r52(A), 4wzc(A), 5v26(A), 5v27(A), 5v28(A), 6bvp(A), 6bvq(A), 6bvr(A), 6bvs(A), 6cd3(A), 6d60(A), 6d61(A), 6d62(A).

 

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