Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code Q1LCS4
Ligand clusters for Q1LCS4: 3-hydroxyanthranilate 3,4-dioxygenase from Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
3 ligand clusters
Cluster 1.
14 ligand types
42 ligands
Cluster 2.
1 ligand type
20 ligands
Cluster 3.
2 ligand types
22 ligands
Representative protein: 6vibA
Structures
PDB
Schematic diagram
6vib
A
4i3p
A
4l2n
A
1yfu
A
4wzc
A
more ...
Cluster 1 contains 14 ligand types
Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file.
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
3HA × 1
3-Hydroxyanthranilic acid
PDB code:
1yfy
(A).
_Fe
2. Metal:
_FE × 4
PDB codes:
1yfu
(A),
1yfw
(A),
1yfy
(A),
4hvr
(A).
3. Ligand:
SAL × 1
salicylic acid
2-Hydroxybenzoic acid
PDB code:
4hvr
(A).
4. Ligand:
4AA × 1
4-Chloro-3-Hydroxyanthranilic acid
PDB code:
1yfw
(A).
Fe2
5. Metal:
FE2 × 18
PDB codes:
4hsj
(A),
4hsl
(A),
4hvq
(A),
4i3p
(A),
4l2n
(A),
4r52
(A),
4wzc
(A),
5v26
(A),
5v27
(A),
5v28
(A),
6bvp
(A),
6bvq
(A),
6bvr
(A),
6bvs
(A),
6cd3
(A),
6d60
(A),
6d61
(A),
6d62
(A).
6. Ligand:
3HA × 5
3-Hydroxyanthranilic acid
PDB codes:
4hsl
(A),
6cd3
(A),
6d62
(A),
6vi6
(A),
6vi7
(A).
7. Ligand:
4AA × 3
4-Chloro-3-Hydroxyanthranilic acid
PDB codes:
6bvq
(A),
6bvs
(A),
6d61
(A).
8. Ligand:
2FO × 2
(2z,3z)-2-[(2z)-3-Hydroxyprop-2-En-1-Ylidene]-3- Iminobutanedioic acid
PDB codes:
6vib
(A),
6x11
(A).
_Cl
9. Metal:
_CL × 2
PDB codes:
1yfu
(A),
4l2n
(A).
10. Ligand:
1CW × 1
3-Amino-2-Hydroxybenzoic acid
PDB code:
4i3p
(A).
11. Ligand:
1UC × 1
(2e)-2-Amino-3-[(1e)-3-Oxoprop-1-En-1-Yl]but-2-Enedioic acid
PDB code:
4wzc
(A).
12. Ligand:
6PC × 1
Pyridine-2-Carboxylic acid
PDB code:
4hsj
(A).
13. Ligand:
QXM × 1
(5r,6z)-5-(Hydroperoxy-Kappao)-5-(Hydroxy-Kappao)-6- Iminocyclohexa-1,3-Diene-1-Carboxylato(2-)Iron
PDB code:
6vi9
(A).
_Cu
14. Metal:
_CU × 1
PDB code:
4hvo
(A).
Cluster 2 contains 1 ligand type
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
1. Ligand:
TRS × 20
tromethamine
2-Amino-2-Hydroxymethyl-Propane-1,3-Diol
PDB codes:
1yfu
(A),
1yfw
(A),
1yfy
(A),
4l2n
(A),
4r52
(A),
5v27
(A),
5v28
(A),
6bvp
(A),
6bvq
(A),
6bvr
(A),
6bvs
(A),
6d60
(A),
6d61
(A),
6d62
(A),
6vi5
(A),
6vi6
(A),
6vi7
(A),
6vi9
(A),
6vib
(A),
6x11
(A).
Cluster 3 contains 2 ligand types
Selection shortcuts:
select all/none
invert selection.
Ligand
Description
_Fe
1. Metal:
_FE × 4
PDB codes:
1yfu
(A),
1yfw
(A),
1yfy
(A),
4hvr
(A).
Fe2
2. Metal:
FE2 × 18
PDB codes:
4hsj
(A),
4hsl
(A),
4hvo
(A),
4i3p
(A),
4l2n
(A),
4r52
(A),
4wzc
(A),
5v26
(A),
5v27
(A),
5v28
(A),
6bvp
(A),
6bvq
(A),
6bvr
(A),
6bvs
(A),
6cd3
(A),
6d60
(A),
6d61
(A),
6d62
(A).