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EBI
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PDBsum
Ligand clusters for UniProt code Q13569
Ligand clusters for Q13569: G/T mismatch-specific thymine DNA glycosylase from Homo sapiens
Top 6 (of 13) ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1wywA
Structures
PDB
Schematic diagram
1wyw
A
4jgc
A
4fnc
A
4z47
A
4z7z
A
more ...
Cluster 1 contains 4 ligand types
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Ligand
Description
1. Ligand:
ACY × 5
acetic acid
Acetic acid
PDB codes:
4xeg
(A),
4z47
(A),
4z7b
(A),
4z7z
(A),
5cys
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
1wyw
(A).
3. Ligand:
1RT × 1
4-Amino-2-Oxo-1,2-Dihydropyrimidine-5-Carboxylic acid
PDB code:
4jgc
(A).
4. Ligand:
HMU × 1
5-Hydroxymethyl uracil
PDB code:
4fnc
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
4z7b
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4z47
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACT × 1
Acetate ion
PDB code:
6u17
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
6u16
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
4xeg
(A),
4z47
(A),
4z7z
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4xeg
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACY × 1
acetic acid
Acetic acid
PDB code:
4xeg
(A).