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Ligand clusters for UniProt code Q13569

Ligand clusters for Q13569: G/T mismatch-specific thymine DNA glycosylase from Homo sapiens

Top 6 (of 13) ligand clusters
Cluster 1.
4 ligand types
8 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
1 ligand type
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1wywA  
JSmol
 

Structures

PDB   Schematic diagram
1wywA    
4jgcA    
4fncA    
4z47A    
4z7zA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: ACY × 5
acetic acid
Acetic acid
PDB codes: 4xeg(A), 4z47(A), 4z7b(A), 4z7z(A), 5cys(A).

_Mg
 
2. Metal: _MG × 1
PDB code: 1wyw(A).


 
3. Ligand: 1RT × 1
4-Amino-2-Oxo-1,2-Dihydropyrimidine-5-Carboxylic acid
PDB code: 4jgc(A).


 
4. Ligand: HMU × 1
5-Hydroxymethyl uracil
PDB code: 4fnc(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACY × 1
acetic acid
Acetic acid
PDB code: 4z7b(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4z47(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: ACT × 1
Acetate ion
PDB code: 6u17(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 6u16(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 4xeg(A), 4z47(A), 4z7z(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4xeg(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACY × 1
acetic acid
Acetic acid
PDB code: 4xeg(A).

 

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