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Ligand clusters for UniProt code Q12154

Ligand clusters for Q12154: ATPase GET3 from Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

Top 6 (of 8) ligand clusters
Cluster 1.
5 ligand types
34 ligands
Cluster 2.
3 ligand types
13 ligands
Cluster 3.
1 ligand type
2 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
27 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3sjaA  
JSmol
 

Structures

PDB   Schematic diagram
3sjaA    
3sjbB    
3sjbA    
3b2eA    
3a37A    
 more ...

 

 Cluster 1 contains 5 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 11
PDB codes: 2woj(A), 3sjd(A), 3zs9(A), 4pwx(A), 4xtr(A), 4xwo(A),


 
2. Ligand: ADP × 10
Adenosine-5'-Diphosphate
PDB codes: 3a37(A), 3b2e(A), 3sjd(A), 3vlc(A), 4xtr(A), 4xwo(A),


 
3. Ligand: ADP-ALF × 5
ALF=Tetrafluoroaluminate ion, ADP=Adenosine-5'-Diphosphate.
PDB codes: 2woj(A), 3zs9(A),


 
4. Ligand: ATP × 4
Adenosine-5'-Triphosphate
PDB codes: 4pwx(A), 4xtr(A), 4xwo(A),


 
5. Ligand: PO4 × 4
Phosphate ion
PDB codes: 3sja(A), 3sjb(A),

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: ADP-ALF × 5
ALF=Tetrafluoroaluminate ion, ADP=Adenosine-5'-Diphosphate.
PDB codes: 2woj(A), 3zs9(A),


 
2. Ligand: ADP × 4
Adenosine-5'-Diphosphate
PDB codes: 3sjd(A), 4xtr(A), 4xwo(A),


 
3. Ligand: ATP × 4
Adenosine-5'-Triphosphate
PDB codes: 4pwx(A), 4xtr(A), 4xwo(A),

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 2
Phosphate ion
PDB codes: 3sja(A), 3sjb(B).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: PO4 × 1
Phosphate ion
PDB code: 3sja(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description

_Zn
 
1. Metal: _ZN × 27
PDB codes: 2woj(A), 3a36(A), 3a37(A), 3h84(A), 3idq(A), 3sja(A), 3sjb(A), 3sjc(A), 3sjd(A), 3zs8(A), 3zs9(A), 4pwx(A), 4xtr(A), 4xwo(A), 5bw8(A), 5bwk(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description

_Na
 
1. Metal: _NA × 1
PDB code: 3h84(A).

 

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