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EBI
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Ligand clusters for UniProt code Q097N3
Ligand clusters for Q097N3: Photoreceptor-histidine kinase BphP OS=Stigmatella aurantiaca (strain DW4/3-1) GN=STAUR_8015 PE=1 SV=1
Top 6 (of 16) ligand clusters
Cluster 1.
2 ligand types
7 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
5 ligands
Cluster 4.
1 ligand type
2 ligands
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 6bapA
Structures
PDB
Schematic diagram
6bap
A
6bao
A
6bay
A
4rpw
A
6baf
A
more ...
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
BLR × 5
3-[5-[(Z)-(4-Ethenyl-3-Methyl-5-Oxidanylidene-Pyrrol-2- Ylidene)methyl]-2-[[5-[(Z)-(3-Ethenyl-4-
Methyl-5- Oxidanylidene-Pyrrol-2-Ylidene)methyl]-3-(3-Hydroxy-3- Oxopropyl)-4-Methyl-1h-Pyrrol-2-
Yl]methyl]-4-Methyl- 1h-Pyrrol-3-Yl]propanoic acid
PDB codes:
6baf
(A),
6bak
(A),
6bao
(A),
6bap
(A),
6bay
(A).
2. Ligand:
BLA × 2
Biliverdine IX alpha
PDB codes:
4rpw
(A),
4rq9
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4rq9
(A).
2. Ligand:
PG4 × 1
Tetraethylene glycol
PDB code:
4rpw
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
4rpw
(A),
4rq9
(A),
2. Ligand:
SRT × 1
S,R meso-Tartaric acid
PDB code:
4rq9
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4rpw
(A),
4rq9
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4rpw
(A),
4rq9
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4rpw
(A).