Ligand clusters for UniProt code Q01693

Ligand clusters for Q01693: Bacterial leucyl aminopeptidase from Vibrio proteolyticus

		Top 6 (of 15) ligand clusters Cluster 1. 14 ligand types 63 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 2 ligand types 2 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 5 ligands Cluster 6. 1 ligand type 1 ligand
Representative protein: 1ampA

Structures

PDB		Schematic diagram
1ampA
2prqA
1igbA
3b3sA
3b3cA
		more ...

Cluster 1 contains 14 ligand types

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Ligand		Description
_Zn		1. Metal: _ZN × 42 PDB codes: 1amp(A), 1cp6(A), 1ft7(A), 1igb(A), 1lok(A), 1rtq(A), 1txr(A), 1xry(A), 2anp(A), 2dea(A), 2iq6(A), 2nyq(A), 3b35(A), 3b3c(A), 3b3s(A), 3b3t(A), 3b3v(A), 3b3w(A), 3b7i(A), 3fh4(A), 3vh9(A),
		2. Ligand: TRS × 3 tromethamine 2-Amino-2-Hydroxymethyl-Propane-1,3-Diol PDB codes: 1lok(A), 2prq(A), 3fh4(A).
		3. Ligand: VAL × 1 valine PDB code: 3b3v(A).
		4. Ligand: LEU × 3 PDB codes: 3b3s(A), 3b3w(A), 3b7i(A).
		5. Ligand: PLU × 3 Leucine phosphonic acid PDB codes: 1ft7(A), 3b3c(A), 3b7i(A).
		6. Ligand: BES × 2 2-(3-Amino-2-Hydroxy-4-Phenyl-Butyrylamino)-4-Methyl- Pentanoic acid PDB codes: 1txr(A), 1xry(A).
_Co		7. Metal: _CO × 2 PDB codes: 2prq(A),
		8. Ligand: BUB × 1 1-Butane boronic acid PDB code: 1cp6(A).
		9. Ligand: HQY × 1 Quinolin-8-Ol PDB code: 3vh9(A).
		10. Ligand: ILE × 1 PDB code: 3b3t(A).
		11. Ligand: IPO × 1 Para-Iodo-D-Phenylalanine hydroxamic acid PDB code: 1igb(A).
		12. Ligand: LEU-LEU-LEU × 1 PDB code: 2iq6(A).
		13. Ligand: TRP × 1 PDB code: 2nyq(A).
_Na		14. Metal: _NA × 1 PDB code: 3vh9(A).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3vh9(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
_Cl		1. Metal: _CL × 1 PDB code: 3vh9(A).
_Na		2. Metal: _NA × 1 PDB code: 3fh4(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
_Cl		1. Metal: _CL × 1 PDB code: 3vh9(A).
_Na		2. Metal: _NA × 1 PDB code: 3fh4(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 5 PDB codes: 1lok(A), 1rtq(A), 2anp(A), 2dea(A), 3vh9(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
_Na		1. Metal: _NA × 1 PDB code: 1rtq(A).