Ligand clusters for UniProt code Q007T0

Ligand clusters for Q007T0: Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial from Sus scrofa

		4 ligand clusters Cluster 1. 22 ligand types 33 ligands Cluster 2. 1 ligand type 23 ligands Cluster 3. 1 ligand type 23 ligands Cluster 4. 1 ligand type 23 ligands
Representative protein: 3sfeB

Structures

PDB		Schematic diagram
3sfeB
3aefB
3ae7B
3ae9B
4yxdB
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Cluster 1 contains 22 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: TMG × 1 thiabendazole 2-(1,3-Thiazol-4-Yl)-1h-Benzimidazole PDB code: 3sfe(B).
		2. Ligand: HEM × 11 Protoporphyrin IX containing fe PDB codes: 1zp0(B), 3abv(B), 3ae3(B), 3ae4(B), 3ae5(B), 3ae6(B), 3ae9(B), 3aea(B), 3aec(B), 3aef(B), 4ytp(B).
		3. Ligand: FTN × 2 N-[3-(1-Methylethoxy)phenyl]-2-(Trifluoromethyl) benzamide PDB codes: 3ae8(B), 4yxd(B).
		4. Ligand: 11J × 1 N-Biphenyl-3-Yl-2-Iodobenzamide PDB code: 3aeg(B).
		5. Ligand: 12J × 1 2-Iodo-N-[3-(1-Methylethoxy)phenyl]benzamide PDB code: 3ae7(B).
		6. Ligand: AT5 × 1 3-[(2s,4s,5r)-5,6-Dichloro-2,4-Dimethyl-1-Oxohexyl]-4- Hydroxy-5,6-Dimethoxy-2(1h)-Pyridinone PDB code: 3aee(B).
		7. Ligand: BOL × 1 2-Iodo-N-Phenylbenzamide PDB code: 3aed(B).
		8. Ligand: E23 × 1 N-(4-Tert-Butylbenzyl)-2-(Trifluoromethyl)benzamide PDB code: 4ytp(B).
		9. Ligand: EBM × 1 2-Iodo-N-(1-Methylethyl)benzamide PDB code: 3aec(B).
		10. Ligand: F6A × 1 N-Biphenyl-3-Yl-2-(Trifluoromethyl)benzamide PDB code: 3abv(B).
		11. Ligand: F7A × 1 N-(3-Phenoxyphenyl)-2-(Trifluoromethyl)benzamide PDB code: 3aeb(B).
		12. Ligand: F9A × 1 N-{3-[(Dimethylamino)methyl]phenyl}-2- (Trifluoromethyl)benzamide PDB code: 3aea(B).
		13. Ligand: FD8 × 1 N-[3-(Pentafluorophenoxy)phenyl]-2-(Trifluoromethyl) benzamide PDB code: 3ae9(B).
		14. Ligand: JMP × 1 2-{[3-(1-Methylethoxy)phenyl]carbamoyl}benzoic acid PDB code: 3ae6(B).
		15. Ligand: MRN × 1 2-Methyl-N-[3-(1-Methylethoxy)phenyl]benzamide PDB code: 3ae5(B).
		16. Ligand: N1M × 1 2-Iodo-N-Methylbenzamide PDB code: 3ae4(B).
		17. Ligand: NBI × 1 2-Nitro-N-Phenylbenzamide PDB code: 3ae3(B).
		18. Ligand: PCI × 1 Pentachlorophenol PDB code: 3sfd(B).
		19. Ligand: SLI × 1 2-Hydroxy-N-Phenylbenzamide PDB code: 3ae2(B).
		20. Ligand: TFZ × 1 N-Phenyl-2-(Trifluoromethyl)benzamide PDB code: 3ae1(B).
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Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: SF4 × 23 Iron/sulfur cluster PDB codes: 1zoy(B), 1zp0(B), 3abv(B), 3ae1(B), 3ae2(B), 3ae3(B), 3ae4(B), 3ae5(B), 3ae6(B), 3ae7(B), 3ae8(B), 3ae9(B), 3aea(B), 3aeb(B), 3aec(B), 3aed(B), 3aee(B), 3aef(B), 3aeg(B), 3sfd(B), 3sfe(B), 4ytp(B), 4yxd(B).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: F3S × 23 Fe3-S4 cluster PDB codes: 1zoy(B), 1zp0(B), 3abv(B), 3ae1(B), 3ae2(B), 3ae3(B), 3ae4(B), 3ae5(B), 3ae6(B), 3ae7(B), 3ae8(B), 3ae9(B), 3aea(B), 3aeb(B), 3aec(B), 3aed(B), 3aee(B), 3aef(B), 3aeg(B), 3sfd(B), 3sfe(B), 4ytp(B), 4yxd(B).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: FES × 23 Fe2/s2 (inorganic) cluster PDB codes: 1zoy(B), 1zp0(B), 3abv(B), 3ae1(B), 3ae2(B), 3ae3(B), 3ae4(B), 3ae5(B), 3ae6(B), 3ae7(B), 3ae8(B), 3ae9(B), 3aea(B), 3aeb(B), 3aec(B), 3aed(B), 3aee(B), 3aef(B), 3aeg(B), 3sfd(B), 3sfe(B), 4ytp(B), 4yxd(B).