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Ligand clusters for UniProt code P9WFX5
Ligand clusters for P9WFX5: Anthranilate phosphoribosyltransferase from Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Top 6 (of 15) ligand clusters
Cluster 1.
26 ligand types
63 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
4 ligand types
5 ligands
Cluster 4.
3 ligand types
7 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
2 ligand types
3 ligands
Representative protein: 5c2lA
Structures
PDB
Schematic diagram
5c2l
A
3uu1
A
5byt
A
4x5c
A
3r6c
A
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Cluster 1 contains 26 ligand types (of which only 20 are listed. Click
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Ligand
Description
1. Ligand:
PRP × 22
5-o-phosphono-alpha-d-ribofuranosyl diphosphate
1-O-Pyrophosphono-5-O-Phosphono-Alpha-D-Ribofuranose
PDB codes:
1zvw
(A),
3qqs
(A),
3qs8
(A),
3qsa
(A),
3r6c
(A),
3r88
(A),
3twp
(A),
3uu1
(A),
4giu
(A),
4gkm
(A),
4n5v
(A),
4n93
(A),
4owm
(A),
4owo
(A),
4owq
(A),
4owu
(A),
4x58
(A),
4x59
(A),
4x5b
(A),
4x5c
(A),
5byt
(A),
5c7s
(A).
2. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
4gkm
(A),
4ij1
(A),
4x58
(A).
_Mg
3. Metal:
_MG × 2
PDB codes:
4x5e
(A),
_Mn
4. Metal:
_MN × 2
PDB codes:
5c7s
(A),
5. Ligand:
SAL × 1
salicylic acid
2-Hydroxybenzoic acid
PDB code:
3twp
(A).
6. Ligand:
BE2 × 4
2-Aminobenzoic acid
PDB codes:
4owv
(A),
4x5d
(A),
4x5e
(A),
7. Ligand:
FA0 × 3
2-Amino-4-Fluorobenzoic acid
PDB codes:
4n5v
(A),
4n8q
(A).
8. Ligand:
POP × 3
Pyrophosphate 2-
PDB codes:
4own
(A),
4ows
(A),
4x5e
(A).
9. Ligand:
17C × 2
2,2'-Iminodibenzoic acid
PDB codes:
3qqs
(A),
4ij1
(A).
10. Ligand:
17D × 2
2-Benzylbenzoic acid
PDB codes:
3qs8
(A),
11. Ligand:
5RG × 2
2-Amino-5-Fluorobenzoic acid
PDB codes:
4own
(A),
12. Ligand:
6F0 × 2
2-Azanyl-6-Fluoranyl-Benzoic acid
PDB codes:
4owo
(A),
13. Ligand:
6M1 × 2
2-Amino-6-Methylbenzoic acid
PDB codes:
4n93
(A),
14. Ligand:
14B × 1
2-Amino-3,5-Dimethylbenzoic acid
PDB code:
3uu1
(A).
15. Ligand:
17N × 1
8-Methoxyphenanthro[3,4-D][1,3]dioxole-5,6-Dicarboxylic acid
PDB code:
3r6c
(A).
16. Ligand:
3F0 × 1
2-Azanyl-3-Fluoranyl-Benzoic acid
PDB code:
4owm
(A).
17. Ligand:
3M0 × 1
2-Azanyl-3-Methyl-Benzoic acid
PDB code:
4owq
(A).
18. Ligand:
4M0 × 1
2-Azanyl-4-Methyl-Benzoic acid
PDB code:
4ows
(A).
19. Ligand:
51N × 1
5-O-[(R)-Hydroxy(phosphonooxy)phosphoryl]-1-O- Phosphono-Alpha-D-Ribofuranose
PDB code:
5c1r
(A).
20. Ligand:
5M0 × 1
2-Azanyl-5-Methyl-Benzoic acid
PDB code:
4owu
(A).
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Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
4giu
(A),
4gkm
(A),
4x58
(A).
2. Ligand:
17N × 1
8-Methoxyphenanthro[3,4-D][1,3]dioxole-5,6-Dicarboxylic acid
PDB code:
3r6c
(A).
Cluster 3 contains 4 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
2bpq
(A),
3qr9
(A).
2. Ligand:
DMS × 1
dimethyl sulfoxide
Dimethyl sulfoxide
PDB code:
4giu
(A).
3. Ligand:
BAM × 1
Benzamidine
PDB code:
1zvw
(A).
4. Ligand:
BEN × 1
Benzamidine
PDB code:
2bpq
(A).
Cluster 4 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
glycerin
Glycerol
PDB codes:
4giu
(A),
4x59
(A),
4x5a
(A),
4x5e
(A).
2. Ligand:
IMD × 2
Imidazole
PDB codes:
4x5d
(A),
5bne
(A).
3. Ligand:
MLT × 1
D-Malate
PDB code:
4x58
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4gkm
(A),
4x5e
(A).
2. Ligand:
IMD × 1
Imidazole
PDB code:
4ij1
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
glycerin
Glycerol
PDB codes:
4giu
(A),
4x58
(A).
2. Ligand:
DMS × 1
dimethyl sulfoxide
Dimethyl sulfoxide
PDB code:
4gkm
(A).