Ligand clusters for UniProt code P95748

Ligand clusters for P95748: dTDP-3-amino-3,6-dideoxy-alpha-D-glucopyranose N,N-dimethyltransferase from Streptomyces fradiae

		4 ligand clusters Cluster 1. 7 ligand types 19 ligands Cluster 2. 1 ligand type 2 ligands Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 1 ligand
Representative protein: 3pfgA

Structures

PDB		Schematic diagram
3pfgA
6m81A
3px2A
3px3A
6m83A
		more ...

Cluster 1 contains 7 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: SAM × 1 ademetionine S-Adenosylmethionine PDB code: 3pfg(A).
		2. Ligand: SAH × 8 S-Adenosyl-L-Homocysteine PDB codes: 3pfh(A), 3px2(A), 3px3(A), 4oqd(A), 4oqe(A), 6m81(A), 6m82(A), 6m83(A).
		3. Ligand: TLO × 4 5'-O-[(S)-Hydroxy{[(s)-Hydroxy(phenoxy) phosphoryl]oxy}phosphoryl]thymidine PDB codes: 3pfg(A), 6m81(A), 6m82(A), 6m83(A).
		4. Ligand: T3Q × 3 [(3r,4s,5s,6r)-4-Amino-3,5-Dihydroxy-6-Methyloxan-2- Yl][hydroxy-[[(2r,3s,5r)-3-Hydroxy-5-(5- Methyl-2,4- Dioxopyrimidin-1-Yl)oxolan-2-Yl]methoxy]phosphoryl] hydrogen phosphate PDB codes: 3pfh(A), 3px2(A), 3px3(A).
		5. Ligand: EDO × 1 1,2-Ethanediol PDB code: 3pfg(A).
		6. Ligand: MMF × 1 Dtdp-3-N-Methylamino-3,6-Dideoxygalactose PDB code: 4oqe(A).
		7. Ligand: QDM × 1 Tdp-3,6-Dideoxy-3-N,N-Dimethylglucose PDB code: 4oqd(A).

Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: EDO × 2 1,2-Ethanediol PDB codes: 3pfh(A), 3px3(A).

Cluster 3 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 6m82(A).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
_Cl		1. Metal: _CL × 1 PDB code: 6m83(A).