Ligand clusters for UniProt code P60472

Ligand clusters for P60472: Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) from Escherichia coli (strain K12)

		5 ligand clusters Cluster 1. 27 ligand types 55 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 1 ligand Cluster 4. 1 ligand type 2 ligands Cluster 5. 1 ligand type 2 ligands
Representative protein: 1x07A

Structures

PDB		Schematic diagram
1x07A
1x09A
1x06A
1x08A
1uehA
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Cluster 1 contains 27 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: IPE × 4 3-Methylbut-3-Enyl trihydrogen diphosphate PDB codes: 1x07(A), 1x08(A), 1x09(A),
_Mg		2. Metal: _MG × 2 PDB codes: 1x06(A), 1x07(A).
		3. Ligand: FPP × 2 Farnesyl diphosphate PDB codes: 1v7u(A),
		4. Ligand: PO4 × 2 Phosphate ion PDB codes: 1x06(A), 1x07(A).
		5. Ligand: FPS × 4 S-[(2e,6e)-3,7,11-Trimethyldodeca-2,6,10-Trienyl] trihydrogen thiodiphosphate PDB codes: 1x06(A), 1x08(A),
		6. Ligand: B08 × 3 (1-Hydroxy-1-Phosphono-2-[1,1';3',1'']Terphenyl-3-Yl- Ethyl)-Phosphonic acid PDB codes: 2e99(A),
		7. Ligand: B28 × 2 (1-Hydroxy-1-Phosphono-2-[1,1';4',1'']Terphenyl-3-Yl- Ethyl)-Phosphonic acid PDB codes: 2e9a(A),
		8. Ligand: B29 × 4 [2-(3-Dibenzofuran-4-Yl-Phenyl)-1-Hydroxy-1-Phosphono- Ethyl]-Phosphonic acid PDB codes: 2e98(A),
		9. Ligand: B76 × 2 [1-Hydroxy-2-(1,1':3',1''-Terphenyl-3-Yloxy)ethane-1, 1-Diyl]bis(phosphonic acid) PDB codes: 2e9d(A),
		10. Ligand: B75 × 3 1-Hydroxy-2-[3'-(Naphthalene-2-Sulfonylamino)- Biphenyl-3-Yl]ethylidene-1,1-Bisphosphonic acid PDB codes: 2e9c(A),
		11. Ligand: EGC × 1 2-(2-{2-[2-(2-{2-[2-(2-{2-[4-(1,1,3,3-Tetramethyl- Butyl)-Phenoxy]-Ethoxy}-Ethoxy)-Ethoxy]-Ethoxy}- Ethoxy)-Ethoxy]-Ethoxy}-Ethoxy)-Ethanol PDB code: 1jp3(A).
		12. Ligand: OXN × 2 Oxtoxynol-10 PDB codes: 1ueh(B),
		13. Ligand: SO4 × 4 Sulfate ion PDB codes: 1ueh(A),
		14. Ligand: SAX × 3 2-(Dodecyloxy)-6-Hydroxybenzoic acid PDB codes: 3sh0(B),
		15. Ligand: 0FW × 2 4-{3-[(Biphenyl-4-Ylcarbonyl)amino]phenoxy}benzene-1,2- Dicarboxylic acid PDB codes: 3sgx(A),
		16. Ligand: 0YW × 2 2-{[3-(Decyloxy)benzoyl]amino}-5-Nitrobenzoic acid PDB codes: 4h2o(B),
		17. Ligand: 0YZ × 2 (2z)-4-[3-(Decyloxy)phenyl]-2-Hydroxy-4-Oxobut-2-Enoic acid PDB codes: 4h3c(A),
		18. Ligand: 2BJ × 2 2-{[3-(3,4-Dimethylphenoxy)phenyl]carbamoyl}-4- Nitrobenzoic acid PDB codes: 3sgv(B),
		19. Ligand: 0YU × 1 N~4~-[4-(4,5-Dihydro-1h-Imidazol-2-Yl)phenyl]-N~1~-[4- (1h-Imidazol-2-Yl)phenyl]-2-Nitrobenzene- 1,4- Dicarboxamide PDB code: 4h2j(A).
		20. Ligand: 0YV × 1 2,2'-{Benzene-1,3-Diylbis[ethyne-2,1-Diyl(5- Bromobenzene-3,1-Diyl)]}diethanamine PDB code: 4h2m(A).
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Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1ueh(B).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 1ueh(B).

Cluster 4 contains 1 ligand type

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Ligand		Description
_Mg		1. Metal: _MG × 2 PDB codes: 1ueh(A),

Cluster 5 contains 1 ligand type

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Ligand		Description
_Mg		1. Metal: _MG × 2 PDB codes: 1ueh(A),