Ligand clusters for UniProt code P59087

Ligand clusters for P59087: Photosystem II reaction center protein J from Thermosynechococcus elongatus (strain BP-1)

		3 ligand clusters Cluster 1. 11 ligand types 188 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 1 ligand type 2 ligands
Representative protein: 4pbuj

Structures

PDB		Schematic diagram
4pbuj
5kafJ
5tisJ
5h2fJ
5e7cJ
		more ...

Cluster 1 contains 11 ligand types

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Ligand		Description
		1. Ligand: BCR × 70 beta carotene Beta-Carotene PDB codes: 1s5l(J), 2axt(J), 3bz1(J), 3bz2(J), 3kzi(J), 3prq(J), 3prr(J), 4fby(J), 4ixq(J), 4ixr(J), 4pbu(j), 4pj0(J), 4rvy(J), 4tnh(J), 4tni(J), 4tnj(J), 4tnk(J), 5e79(J), 5e7c(J), 5h2f(j), 5kaf(J), 5kai(J), 5mx2(J), 5tis(J), 5zzn(J),
_Mg		2. Metal: _MG × 4 PDB codes: 4pbu(j), 4rvy(J), 5e79(J), 5e7c(J).
		3. Ligand: DGD × 56 Digalactosyl diacyl glycerol (dgdg) PDB codes: 2axt(J), 3bz1(J), 3bz2(J), 3kzi(J), 3prq(J), 3prr(J), 4fby(J), 4ixq(J), 4ixr(J), 4pbu(J), 4pj0(J), 4rvy(J), 4tnh(J), 4tni(J), 4tnj(J), 4tnk(J), 5e79(J), 5e7c(J), 5h2f(J), 5kaf(J), 5kai(J), 5mx2(J), 5tis(J), 5zzn(J),
		4. Ligand: LMG × 32 1,2-Distearoyl-Monogalactosyl-Diglyceride PDB codes: 3bz1(J), 3bz2(J), 3kzi(J), 3prq(J), 3prr(J), 4fby(J), 4ixq(J), 4ixr(J), 4pj0(J), 4rvy(J), 4tnh(J), 4tni(J), 4tnj(J), 4tnk(J), 5e79(J), 5e7c(J), 5h2f(J), 5kaf(J), 5kai(J), 5mx2(J), 5tis(J), 5zzn(J),
		5. Ligand: PL9 × 9 2,3-Dimethyl-5-(3,7,11,15,19,23,27,31,35-Nonamethyl-2, 6,10,14,18,22,26,30,34- Hexatriacontanonaenyl-2,5- Cyclohexadiene-1,4-Dione-2,3-Dimethyl-5-Solanesyl-1,4- Benzoquinone PDB codes: 3bz1(J), 3bz2(J), 4fby(J), 4ixq(J), 4ixr(J), 4tnh(J), 4tni(J), 4tnj(J), 4tnk(J).
		6. Ligand: UNL × 7 Unknown ligand PDB codes: 4pj0(J), 5h2f(j), 5tis(J), 5zzn(J),
		7. Ligand: SQD × 5 1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol PDB codes: 4pbu(J), 4rvy(J), 5e79(J), 5e7c(J), 5h2f(J).
		8. Ligand: LMT × 2 Dodecyl-Beta-D-Maltoside PDB codes: 5zzn(j),
		9. Ligand: LFA × 1 Eicosane PDB code: 5mx2(J).
		10. Ligand: MGE × 1 (1s)-2-(Alpha-L-Allopyranosyloxy)-1-[(Tridecanoyloxy) methyl]ethyl palmitate PDB code: 2axt(J).
		11. Ligand: UNK × 1 PDB code: 2axt(J).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: UNL × 1 Unknown ligand PDB code: 5zzn(j).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: DMS × 2 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 5h2f(J),