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EBI
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Ligand clusters for UniProt code P43873
Ligand clusters for P43873: Biotin carboxylase from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
5 ligand clusters
Cluster 1.
12 ligand types
17 ligands
Cluster 2.
1 ligand type
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
3 ligands
Representative protein: 6ojhA
Structures
PDB
Schematic diagram
6ojh
A
4rzq
A
6oi8
A
4mv4
A
4mv1
A
more ...
Cluster 1 contains 12 ligand types
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Ligand
Description
1. Ligand:
PPF × 1
foscarnet
Phosphonoformic acid
PDB code:
4mv7
(A).
_Mg
2. Metal:
_MG × 1
PDB code:
4mv4
(A).
3. Ligand:
ACP × 3
Phosphomethylphosphonic acid adenylate ester
PDB codes:
4mv3
(A),
4mv4
(A),
4mv8
(A).
4. Ligand:
ADP × 2
Adenosine-5'-Diphosphate
PDB codes:
4mv1
(A),
4rzq
(A).
5. Ligand:
BCT × 2
Bicarbonate ion
PDB codes:
4mv3
(A),
4mv9
(A).
6. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
4mv1
(A),
4mv8
(A).
7. Ligand:
ACT × 1
Acetate ion
PDB code:
6ojh
(A).
8. Ligand:
MQV × 1
7-[(1r,5s,6s)-6-Amino-3-Azabicyclo[3.1.0]hexan-3-Yl]-6- [2-Chloro-6-(Pyridin-3-
Yl)phenyl]pyrido[2,3- D]pyrimidin-2-Amine
PDB code:
6oi8
(A).
9. Ligand:
MV4 × 1
7-[(3r)-3-Aminopyrrolidin-1-Yl]-6-(Naphthalen-1-Yl) pyrido[2,3-D]pyrimidin-2-Amine
PDB code:
6ojh
(A).
10. Ligand:
PCT × 1
Phosphonoacetamide
PDB code:
4mv6
(A).
11. Ligand:
Y7Y × 1
Methyl (3as,4s,6ar)-4-(5-Methoxy-5-Oxopentyl)-2- Oxohexahydro-1h-Thieno[3,4-D]imidazole-1-
Carboxylate
PDB code:
4rzq
(A).
_Cl
12. Metal:
_CL × 1
PDB code:
4mv4
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 5
1,2-Ethanediol
PDB codes:
4mv1
(A),
4mv4
(A),
4mv6
(A),
4mv7
(A),
4mv9
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4mv1
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 5
1,2-Ethanediol
PDB codes:
4mv3
(A),
4mv4
(A),
4mv6
(A),
4mv7
(A),
4mv9
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 3
1,2-Ethanediol
PDB codes:
4mv6
(A),
4mv9
(A),
6oi8
(A).