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Ligand clusters for UniProt code P43873

Ligand clusters for P43873: Biotin carboxylase from Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

5 ligand clusters
Cluster 1.
12 ligand types
17 ligands
Cluster 2.
1 ligand type
5 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
5 ligands
Cluster 5.
1 ligand type
3 ligands
Representative protein: 6ojhA  
JSmol
 

Structures

PDB   Schematic diagram
6ojhA    
4rzqA    
6oi8A    
4mv4A    
4mv1A    
 more ...

 

 Cluster 1 contains 12 ligand types

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Ligand Description


 
1. Ligand: PPF × 1
foscarnet
Phosphonoformic acid
PDB code: 4mv7(A).

_Mg
 
2. Metal: _MG × 1
PDB code: 4mv4(A).


 
3. Ligand: ACP × 3
Phosphomethylphosphonic acid adenylate ester
PDB codes: 4mv3(A), 4mv4(A), 4mv8(A).


 
4. Ligand: ADP × 2
Adenosine-5'-Diphosphate
PDB codes: 4mv1(A), 4rzq(A).


 
5. Ligand: BCT × 2
Bicarbonate ion
PDB codes: 4mv3(A), 4mv9(A).


 
6. Ligand: PO4 × 2
Phosphate ion
PDB codes: 4mv1(A), 4mv8(A).


 
7. Ligand: ACT × 1
Acetate ion
PDB code: 6ojh(A).


 
8. Ligand: MQV × 1
7-[(1r,5s,6s)-6-Amino-3-Azabicyclo[3.1.0]hexan-3-Yl]-6- [2-Chloro-6-(Pyridin-3-
Yl)phenyl]pyrido[2,3- D]pyrimidin-2-Amine
PDB code: 6oi8(A).


 
9. Ligand: MV4 × 1
7-[(3r)-3-Aminopyrrolidin-1-Yl]-6-(Naphthalen-1-Yl) pyrido[2,3-D]pyrimidin-2-Amine
PDB code: 6ojh(A).


 
10. Ligand: PCT × 1
Phosphonoacetamide
PDB code: 4mv6(A).


 
11. Ligand: Y7Y × 1
Methyl (3as,4s,6ar)-4-(5-Methoxy-5-Oxopentyl)-2- Oxohexahydro-1h-Thieno[3,4-D]imidazole-1-
Carboxylate
PDB code: 4rzq(A).

_Cl
 
12. Metal: _CL × 1
PDB code: 4mv4(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 5
1,2-Ethanediol
PDB codes: 4mv1(A), 4mv4(A), 4mv6(A), 4mv7(A), 4mv9(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4mv1(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 5
1,2-Ethanediol
PDB codes: 4mv3(A), 4mv4(A), 4mv6(A), 4mv7(A), 4mv9(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 4mv6(A), 4mv9(A), 6oi8(A).

 

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