Ligand clusters for UniProt code P39304

Ligand clusters for P39304: 3-keto-L-gulonate-6-phosphate decarboxylase UlaD from Escherichia coli (strain K12)

		2 ligand clusters Cluster 1. 8 ligand types 29 ligands Cluster 2. 5 ligand types 13 ligands
Representative protein: 1so6A

Structures

PDB		Schematic diagram
1so6A
1q6lA
1kw1A
1xbvA
1q6rA
		more ...

Cluster 1 contains 8 ligand types

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Ligand		Description
		1. Ligand: 5RP × 2 Ribulose-5-Phosphate PDB codes: 1xbv(A), 1xby(A).
_Mg		2. Metal: _MG × 15 PDB codes: 1kv8(A), 1kw1(A), 1q6l(A), 1q6o(A), 1q6q(A), 1q6r(A), 1so3(A), 1so4(A), 1so5(A), 1so6(A), 1xbv(A), 1xbx(A), 1xby(A), 1xbz(A),
		3. Ligand: LG6 × 2 L-Guluronic acid 6-Phosphate PDB codes: 1kw1(A), 1q6o(A).
		4. Ligand: LXP × 1 L-Xylitol 5-Phosphate PDB code: 1q6q(A).
		5. Ligand: LX1 × 2 L-Xylulose 5-Phosphate PDB codes: 1q6r(A), 1xbz(A).
		6. Ligand: TX4 × 5 L-Threonohydroxamate 4-Phosphate PDB codes: 1q6l(A), 1so3(A), 1so4(A), 1so5(A), 1so6(A).
		7. Ligand: PO4 × 1 Phosphate ion PDB code: 1kv8(A).
		8. Ligand: HMS × 1 5-O-Phosphono-L-Ribulose PDB code: 1xbx(A).

Cluster 2 contains 5 ligand types

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Ligand		Description
		1. Ligand: 5RP × 3 Ribulose-5-Phosphate PDB codes: 1xbv(A), 1xbx(A), 1xby(A).
		2. Ligand: LG6 × 2 L-Guluronic acid 6-Phosphate PDB codes: 1kw1(A), 1q6o(A).
		3. Ligand: LXP × 1 L-Xylitol 5-Phosphate PDB code: 1q6q(A).
		4. Ligand: LX1 × 2 L-Xylulose 5-Phosphate PDB codes: 1q6r(A), 1xbz(A).
		5. Ligand: TX4 × 5 L-Threonohydroxamate 4-Phosphate PDB codes: 1q6l(A), 1so3(A), 1so4(A), 1so5(A), 1so6(A).