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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P31327
Ligand clusters for P31327: Carbamoyl-phosphate synthase [ammonia], mitochondrial from Homo sapiens
Top 6 (of 17) ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
4 ligand types
6 ligands
Cluster 3.
2 ligand types
2 ligands
Cluster 4.
2 ligand types
2 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5douA
Structures
PDB
Schematic diagram
5dou
A
6w2j
A
6uel
A
5dot
A
4uu7
D
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
374 × 1
(2-Fluoranyl-4-Methoxy-Phenyl)-[(3~{r},5~{r})-4-(2- Fluoranyl-4-Methoxy-Phenyl)carbonyl-3,5-
Dimethyl- Piperazin-1-Yl]methanone
PDB code:
6w2j
(A).
2. Ligand:
Q5A × 1
N~1~-[(4-Fluorophenyl)methyl]-N~1~-Methyl-N~4~-(4- Methyl-1,3-Thiazol-2-Yl)piperidine-1,4-
Dicarboxamide
PDB code:
6uel
(A).
Cluster 2 contains 4 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 2
PDB codes:
5dou
(A),
__K
2. Metal:
__K × 2
PDB codes:
5dou
(A),
3. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
5dou
(A).
4. Ligand:
PO4 × 1
Phosphate ion
PDB code:
5dou
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
_Mg
1. Metal:
_MG × 1
PDB code:
5dou
(A).
2. Ligand:
ADP × 1
Adenosine-5'-Diphosphate
PDB code:
5dou
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
JO3 × 1
(2r)-2-Methylbutanedioic acid
PDB code:
4uu7
(D).
2. Ligand:
SUH × 1
(2s)-2-Methylbutanedioic acid
PDB code:
4uu7
(D).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
NLG × 1
N-Acetyl-L-Glutamate
PDB code:
5dou
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
5dot
(A).