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Ligand clusters for UniProt code P29256

Ligand clusters for P29256: Photosystem I reaction center subunit III from Synechocystis sp. (strain PCC 6803 / Kazusa)

2 ligand clusters
Cluster 1.
7 ligand types
63 ligands
Cluster 2.
2 ligand types
3 ligands
Representative protein: 5oy0F  
JSmol
 

Structures

PDB   Schematic diagram
5oy0F    
4kt0F    
6hqbF    
6uzvF    
4l6vF    

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: BCR × 10
beta carotene
Beta-Carotene
PDB codes: 4kt0(F), 4l6v(F), 5oy0(F), 6hqb(F), 6uzv(F),


 
2. Ligand: C7Z × 2
zeaxanthin
(1~{s})-3,5,5-Trimethyl-4-[(1~{e},3~{e},5~{e},7~{e}, 9~{e},11~{e},13~{e},15~{e},17~{e})-3,7,12,16-
Tetramethyl-18-[(4~{s})-2,6,6-Trimethyl-4-Oxidanyl- Cyclohexen-1-Yl]octadeca-
1,3,5,7,9,11,13,15,17- Nonaenyl]cyclohex-3-En-1-Ol
PDB codes: 6hqb(F),


 
3. Ligand: CLA × 45
Chlorophyll a
PDB codes: 4kt0(F), 4l6v(F), 5oy0(F), 6hqb(F), 6uzv(F),


 
4. Ligand: SQD × 2
1,2-Di-O-Acyl-3-O-[6-Deoxy-6-Sulfo-Alpha-D- Glucopyranosyl]-Sn-Glycerol
PDB codes: 5oy0(F), 6hqb(F).


 
5. Ligand: ZEX × 2
(1r,2s)-4-{(1e,3e,5e,7e,9e,11e,13e,15e,17e)-18-[(4s)-4- Hydroxy-2,6,6-Trimethylcyclohex-1-En-1-Yl]-
3,7,12,16- Tetramethyloctadeca-1,3,5,7,9,11,13,15,17-Nonaen-1- Yl}-2,5,5-Trimethylcyclohex-3-En-1-
Ol
PDB codes: 5oy0(F),


 
6. Ligand: LHG × 1
1,2-Dipalmitoyl-Phosphatidyl-Glycerole
PDB code: 5oy0(F).


 
7. Ligand: LMT × 1
Dodecyl-Beta-D-Maltoside
PDB code: 6uzv(F).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: LMT × 2
Dodecyl-Beta-D-Maltoside
PDB codes: 5oy0(F), 6hqb(F).


 
2. Ligand: LMU × 1
Dodecyl-Alpha-D-Maltoside
PDB code: 4kt0(F).

 

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