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Ligand clusters for UniProt code P24474

Ligand clusters for P24474: Nitrite reductase from Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

Top 6 (of 10) ligand clusters
Cluster 1.
2 ligand types
8 ligands
Cluster 2.
2 ligand types
7 ligands
Cluster 3.
2 ligand types
3 ligands
Cluster 4.
1 ligand type
7 ligands
Cluster 5.
1 ligand type
7 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1gjqA  
JSmol
 

Structures

PDB   Schematic diagram
1gjqA    
1bl9A    
6tsiA    
6tpoA    
1n15A    
 more ...

 

 Cluster 1 contains 2 ligand types

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Ligand Description


 
1. Ligand: DHE × 7
Heme d
PDB codes: 1bl9(A), 1hzu(A), 1n15(A), 1n50(A), 1n90(A), 5guw(M), 6tsi(A).


 
2. Ligand: DHE-CYN × 1
DHE=Heme d, CYN=Cyanide ion.
PDB code: 1gjq(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: DHE × 6
Heme d
PDB codes: 1bl9(A), 1n15(A), 1n50(A), 1n90(A), 5guw(M), 6tsi(A).


 
2. Ligand: DHE-CYN × 1
DHE=Heme d, CYN=Cyanide ion.
PDB code: 1gjq(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: HEC × 2
Heme c
PDB codes: 1hzu(A), 6tpo(A).


 
2. Ligand: PO4 × 1
Phosphate ion
PDB code: 6tsi(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: HEC × 7
Heme c
PDB codes: 1bl9(A), 1gjq(A), 1n15(A), 1n50(A), 1n90(A), 5guw(M), 6tsi(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: HEC × 7
Heme c
PDB codes: 1bl9(A), 1gjq(A), 1n15(A), 1n50(A), 1n90(A), 5guw(M), 6tsi(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: 1PE × 1
Pentaethylene glycol
PDB code: 6tpo(A).

 

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