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Ligand clusters for UniProt code P23381

Ligand clusters for P23381: Tryptophan--tRNA ligase, cytoplasmic from Homo sapiens

Top 6 (of 8) ligand clusters
Cluster 1.
7 ligand types
17 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5ujjA  
JSmol
 

Structures

PDB   Schematic diagram
5ujjA    
5ujjB    
1r6uA    
2azxA    
1r6tA    
 more ...

 

 Cluster 1 contains 7 ligand types

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Ligand Description


 
1. Ligand: TRP × 3
PDB codes: 2ake(A), 2azx(A), 2dr2(A).

_Mg
 
2. Metal: _MG × 3
PDB codes: 2qui(A), 5ujj(A),


 
3. Ligand: TYM × 5
Tryptophanyl-5'Amp
PDB codes: 1r6t(A), 1r6u(A), 2quj(A), 5ujj(A),


 
4. Ligand: TRP × 1
PDB code: 2quh(A).


 
5. Ligand: SO4 × 3
Sulfate ion
PDB codes: 2ake(A), 2azx(A), 2dr2(A).


 
6. Ligand: ATP × 1
Adenosine-5'-Triphosphate
PDB code: 2qui(A).


 
7. Ligand: LTN × 1
L-Tryptophanamide
PDB code: 2qui(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: TRP × 1
PDB code: 2azx(A).


 
2. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1r6u(A).

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 1r6t(B), 1r6u(A), 2quj(A).


 
2. Ligand: SO4 × 1
Sulfate ion
PDB code: 2azx(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 1r6t(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 3
glycerin
Glycerol
PDB codes: 1r6t(A), 1r6u(B), 2quj(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 2quj(A).

 

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