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EBI
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Ligand clusters for UniProt code P23381
Ligand clusters for P23381: Tryptophan--tRNA ligase, cytoplasmic from Homo sapiens
Top 6 (of 8) ligand clusters
Cluster 1.
7 ligand types
17 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
3 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 5ujjA
Structures
PDB
Schematic diagram
5ujj
A
5ujj
B
1r6u
A
2azx
A
1r6t
A
more ...
Cluster 1 contains 7 ligand types
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Ligand
Description
1. Ligand:
TRP × 3
PDB codes:
2ake
(A),
2azx
(A),
2dr2
(A).
_Mg
2. Metal:
_MG × 3
PDB codes:
2qui
(A),
5ujj
(A),
3. Ligand:
TYM × 5
Tryptophanyl-5'Amp
PDB codes:
1r6t
(A),
1r6u
(A),
2quj
(A),
5ujj
(A),
4. Ligand:
TRP × 1
PDB code:
2quh
(A).
5. Ligand:
SO4 × 3
Sulfate ion
PDB codes:
2ake
(A),
2azx
(A),
2dr2
(A).
6. Ligand:
ATP × 1
Adenosine-5'-Triphosphate
PDB code:
2qui
(A).
7. Ligand:
LTN × 1
L-Tryptophanamide
PDB code:
2qui
(A).
Cluster 2 contains 2 ligand types
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Ligand
Description
1. Ligand:
TRP × 1
PDB code:
2azx
(A).
2. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1r6u
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1r6t
(B),
1r6u
(A),
2quj
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
2azx
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1r6t
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 3
glycerin
Glycerol
PDB codes:
1r6t
(A),
1r6u
(B),
2quj
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
2quj
(A).