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Ligand clusters for UniProt code P21873

Ligand clusters for P21873: Pyruvate dehydrogenase E1 component subunit alpha from Geobacillus stearothermophilus

2 ligand clusters
Cluster 1.
4 ligand types
10 ligands
Cluster 2.
1 ligand type
1 ligand
Representative protein: 3dufA  
JSmol
 

Structures

PDB   Schematic diagram
3dufA    
3dvaA    
1w88A    
1w85A    
3dv0A    

 

 Cluster 1 contains 4 ligand types

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Ligand Description

_Mg
 
1. Metal: _MG × 5
PDB codes: 1w85(A), 1w88(A), 3duf(A), 3dv0(A), 3dva(A).


 
2. Ligand: TDP × 2
cocarboxylase
Thiamin diphosphate
PDB codes: 1w85(A), 1w88(A).


 
3. Ligand: TPW × 2
2-{4-[(4-Amino-2-Methylpyrimidin-5-Yl)methyl]-3- Methylthiophen-2-Yl}ethyl trihydrogen diphosphate
PDB codes: 3dv0(A), 3dva(A).


 
4. Ligand: R1T × 1
2-{4-[(4-Amino-2-Methylpyrimidin-5-Yl)methyl]-5-[(1r)- 1-Hydroxyethyl]-3-Methyl-2-
Thienyl}ethyl trihydrogen diphosphate
PDB code: 3duf(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: PEG × 1
Di(hydroxyethyl)ether
PDB code: 1w85(A).

 

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