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Ligand clusters for UniProt code P21549

Ligand clusters for P21549: Serine--pyruvate aminotransferase from Homo sapiens

Top 6 (of 22) ligand clusters
Cluster 1.
8 ligand types
19 ligands
Cluster 2.
3 ligand types
6 ligands
Cluster 3.
1 ligand type
3 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
1 ligand type
2 ligands
Representative protein: 1j04A  
JSmol
 

Structures

PDB   Schematic diagram
1j04A    
5f9sA    
5hhyA    
5lucA    
4i8aA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: PLP × 9
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes: 1h0c(A), 2yob(A), 4cbr(A), 4cbs(A), 5f9s(A), 5luc(A), 5ofy(A), 5og0(A), 6rv1(A).


 
2. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 4cbr(A), 4i8a(A).


 
3. Ligand: AOA × 2
(Aminooxy)acetic acid
PDB codes: 1h0c(A), 1j04(A).


 
4. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4kxk(A), 4kyo(A).


 
5. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 4kxk(A).


 
6. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 5ofy(A).


 
7. Ligand: PLR × 1
(5-Hydroxy-4,6-Dimethylpyridin-3-Yl)methyl dihydrogen phosphate
PDB code: 5hhy(A).


 
8. Ligand: PMP × 1
4'-Deoxy-4'-Aminopyridoxal-5'-Phosphate
PDB code: 6rv0(A).

 

 Cluster 2 contains 3 ligand types

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Ligand Description


 
1. Ligand: PLP × 3
pyridoxal phosphate
Pyridoxal-5'-Phosphate
PDB codes: 2yob(A), 5f9s(A), 5luc(A).


 
2. Ligand: SO4 × 2
Sulfate ion
PDB codes: 4kxk(A), 4kyo(A).


 
3. Ligand: PLR × 1
(5-Hydroxy-4,6-Dimethylpyridin-3-Yl)methyl dihydrogen phosphate
PDB code: 5hhy(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: BTB × 3
2-[Bis-(2-Hydroxy-Ethyl)-Amino]-2- Hydroxymethyl-Propane-1,3-Diol
PDB codes: 2yob(A), 4kyo(A), 5luc(A).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1h0c(A), 2yob(A).


 
2. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 4kyo(A).

 

 Cluster 5 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1h0c(A), 1j04(A).


 
2. Ligand: BME × 1
Beta-Mercaptoethanol
PDB code: 4kyo(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 2
glycerin
Glycerol
PDB codes: 1h0c(A), 1j04(A).

 

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