Ligand clusters for UniProt code P13254

Ligand clusters for P13254: L-methionine gamma-lyase from Pseudomonas putida

		Top 6 (of 7) ligand clusters Cluster 1. 6 ligand types 11 ligands Cluster 2. 4 ligand types 5 ligands Cluster 3. 1 ligand type 3 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 1pg8A

Structures

PDB		Schematic diagram
1pg8A
3vk4A
2o7cA
1ukjA
5x30A
		more ...

Cluster 1 contains 6 ligand types

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Ligand		Description
		1. Ligand: MET × 1 methionine PDB code: 3vk3(A).
		2. Ligand: PLP × 1 pyridoxal phosphate Pyridoxal-5'-Phosphate PDB code: 1pg8(A).
		3. Ligand: SO4 × 4 Sulfate ion PDB codes: 1pg8(A), 1ukj(A), 2o7c(A), 3vk2(A).
		4. Ligand: 3LM × 2 (2e)-2-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)amino]-4- (Methylsulfanyl) but-2-Enoic acid PDB codes: 5x2w(A), 5x2z(A).
		5. Ligand: HCS × 2 2-Amino-4-Mercapto-Butyric acid PDB codes: 3vk4(A), 5x30(A).
		6. Ligand: 4LM × 1 (2e)-2-{[(1e)-{3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methylidene]amino}but-2- Enoic acid PDB code: 5x2x(A).

Cluster 2 contains 4 ligand types

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Ligand		Description
		1. Ligand: PLP × 1 pyridoxal phosphate Pyridoxal-5'-Phosphate PDB code: 1pg8(A).
		2. Ligand: 4LM × 2 (2e)-2-{[(1e)-{3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methylidene]amino}but-2- Enoic acid PDB codes: 5x2x(A), 5x30(A).
		3. Ligand: 3LM × 1 (2e)-2-[({3-Hydroxy-2-Methyl-5-[(Phosphonooxy) methyl]pyridin-4-Yl}methyl)amino]-4- (Methylsulfanyl) but-2-Enoic acid PDB code: 5x2w(A).
		4. Ligand: HCS × 1 2-Amino-4-Mercapto-Butyric acid PDB code: 3vk4(A).

Cluster 3 contains 1 ligand type

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Ligand		Description
		1. Ligand: PEG × 3 Di(hydroxyethyl)ether PDB codes: 1pg8(A),

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 1pg8(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 1pg8(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 1pg8(A).