Ligand clusters for UniProt code P12240

Ligand clusters for P12240: Photosystem II reaction center protein I from Thermosynechococcus vulcanus

		2 ligand clusters Cluster 1. 12 ligand types 231 ligands Cluster 2. 1 ligand type 2 ligands
Representative protein: 3wu2i

Structures

PDB		Schematic diagram
3wu2i
5b66i
5b66I
7cjiI
5b5ei
		more ...

Cluster 1 contains 12 ligand types

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Ligand		Description
		1. Ligand: BCR × 56 beta carotene Beta-Carotene PDB codes: 3a0b(I), 3a0h(I), 3wu2(I), 4il6(I), 4ub6(I), 4ub8(I), 5b5e(I), 5b66(I), 5gth(I), 5gti(I), 5v2c(I), 5ws5(I), 5ws6(I), 6jlj(I), 6jlk(I), 6jll(I), 6jlm(I), 6jln(I), 6jlo(I), 6jlp(I), 7cji(I), 7cjj(I), 7cou(I), 7czl(I), 7d1t(I), 7d1u(I),
		2. Ligand: DMS × 3 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 5b5e(i), 5b66(I).
		3. Ligand: CLA × 58 Chlorophyll a PDB codes: 3a0b(I), 3a0h(I), 3wu2(I), 4il6(I), 4ub6(I), 4ub8(I), 5b5e(I), 5b66(I), 5gth(I), 5gti(I), 5v2c(I), 5ws5(I), 5ws6(I), 6jlj(I), 6jlk(I), 6jll(I), 6jlm(I), 6jln(I), 6jlo(I), 6jlp(I), 7cji(I), 7cjj(I), 7cou(I), 7czl(I), 7d1t(I), 7d1u(I),
		4. Ligand: UNL × 51 Unknown ligand PDB codes: 3wu2(I), 4il6(I), 4ub6(I), 4ub8(I), 5b5e(I), 5b66(I), 5gth(I), 5gti(I), 5ws5(I), 5ws6(I), 6jlj(I), 6jlk(I), 6jll(I), 6jlm(I), 6jln(I), 6jlo(I), 6jlp(I), 7cji(I), 7cjj(I), 7cou(I), 7d1t(I), 7d1u(I).
		5. Ligand: LMT × 28 Dodecyl-Beta-D-Maltoside PDB codes: 3wu2(I), 4il6(I), 4ub6(I), 4ub8(I), 5b5e(I), 5b66(I), 5gth(I), 5gti(I), 5v2c(I), 5ws5(I), 5ws6(I), 6jlj(I), 6jlk(I), 6jll(I), 6jlm(I), 6jln(I), 6jlo(I), 6jlp(I), 7cji(I), 7cjj(I), 7cou(I), 7d1t(I), 7d1u(I).
		6. Ligand: LMG × 26 1,2-Distearoyl-Monogalactosyl-Diglyceride PDB codes: 3wu2(I), 4il6(I), 4ub6(I), 4ub8(I), 5b5e(I), 5b66(I), 5gth(I), 5gti(I), 5v2c(I), 5ws5(I), 5ws6(I), 6jlj(I), 6jlk(I), 6jll(I), 6jlm(I), 6jln(I), 6jlo(I), 6jlp(I), 7cji(I), 7cjj(I), 7cou(I), 7d1t(I), 7d1u(I).
		7. Ligand: PG4 × 3 Tetraethylene glycol PDB codes: 5v2c(I),
		8. Ligand: P6G × 2 Hexaethylene glycol PDB codes: 5v2c(I),
		9. Ligand: EDO × 1 1,2-Ethanediol PDB code: 5v2c(I).
		10. Ligand: LHG × 1 1,2-Dipalmitoyl-Phosphatidyl-Glycerole PDB code: 5b5e(i).
		11. Ligand: MGE × 1 (1s)-2-(Alpha-L-Allopyranosyloxy)-1-[(Tridecanoyloxy) methyl]ethyl palmitate PDB code: 7czl(I).
		12. Ligand: PGE × 1 Triethylene glycol PDB code: 5v2c(I).

Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: DMS × 2 dimethyl sulfoxide Dimethyl sulfoxide PDB codes: 5b5e(i), 5b66(i).