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Ligand clusters for UniProt code P0DTD1_10

Ligand clusters for P0DTD1_10: NSP10 - essential for NSP16 methyltransferase activity (138 aa)

Top 6 (of 11) ligand clusters
Cluster 1.
4 ligand types
10 ligands
Cluster 2.
2 ligand types
4 ligands
Cluster 3.
2 ligand types
4 ligands
Cluster 4.
2 ligand types
3 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 7diyA  
JSmol
 

Structures

PDB   Schematic diagram
7diyA    
7lw3B    
7lw4B    
6xkmB    
7jyyB    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: BDF × 3
Beta-D-Fructopyranose
PDB codes: 6w4h(B), 7l6r(B), 7l6t(B).


 
2. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 7lw3(B), 7mc5(M), 7mc6(M).


 
3. Ligand: SO4 × 3
Sulfate ion
PDB codes: 6wq3(B), 6wrz(B), 6wvn(B).


 
4. Ligand: ACT × 1
Acetate ion
PDB code: 7lw4(B).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6zpe(A).


 
2. Ligand: EDO × 3
1,2-Ethanediol
PDB codes: 6w61(B), 7mc5(M),

 

 Cluster 3 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 3
Sulfate ion
PDB codes: 6wq3(B), 6wrz(B), 6wvn(B).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 7mc5(M).

 

 Cluster 4 contains 2 ligand types

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Ligand Description


 
1. Ligand: SO4 × 2
Sulfate ion
PDB codes: 6wq3(B), 6wrz(B).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 7mc5(M).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 7mc5(M).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 7mc5(M).

 

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