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Ligand clusters for UniProt code P0A3G3

Ligand clusters for P0A3G3: Haloalkane dehalogenase from Rhodococcus sp.

Top 6 (of 13) ligand clusters
Cluster 1.
8 ligand types
15 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4kajA  
JSmol
 

Structures

PDB   Schematic diagram
4kajA    
3g9xA    
4kafA    
3fwhA    
5y2xA    
 more ...

 

 Cluster 1 contains 8 ligand types

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Ligand Description


 
1. Ligand: IPA × 2
isopropyl alcohol
Isopropyl alcohol
PDB codes: 3fwh(A), 3g9x(A).

_Cl
 
2. Metal: _CL × 5
PDB codes: 3fwh(A), 3g9x(A), 4hzg(A), 5y2x(A), 5y2y(A).


 
3. Ligand: 1Q9 × 2
N-(2-Ethoxy-3,5-Dimethylbenzyl)-1h-Tetrazol-5-Amine
PDB codes: 4kac(A), 4kaj(A).


 
4. Ligand: OEH × 2
[9-[2-Carboxy-5-[2-[2-(6-Chloranylhexoxy) ethoxy]ethylcarbamoyl]phenyl]-6-(Dimethylamino) xanthen-
3-Ylidene]-Dimethyl-Azanium
PDB codes: 6y7a(A), 6zcc(A).


 
5. Ligand: 8LL × 1
5-(Dimethylamino)-~{N}-[2-(2-Hexoxyethoxy) ethyl]naphthalene-1-Sulfonamide
PDB code: 5y2y(A).


 
6. Ligand: ACT × 1
Acetate ion
PDB code: 6zcc(A).


 
7. Ligand: OEK × 1
4-[2-[2-(6-Chloranylhexoxy)ethoxy]ethylcarbamoyl]-2-[3- (Dimethylamino)-6-(Dimethyl-L^{4}-
Azanylidene)-10,10- Dimethyl-Anthracen-9-Yl]benzoic acid
PDB code: 6y7b(A).

_Na
 
8. Metal: _NA × 1
PDB code: 4kaa(A).

 

 Cluster 2 contains 1 ligand type

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Ligand Description


 
1. Ligand: 8LL × 1
5-(Dimethylamino)-~{N}-[2-(2-Hexoxyethoxy) ethyl]naphthalene-1-Sulfonamide
PDB code: 5y2y(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 6y7a(A).


 
2. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4kaj(A).

_Na
 
3. Metal: _NA × 1
PDB code: 4kaj(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
glycerin
Glycerol
PDB code: 4kaj(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: ACT × 2
Acetate ion
PDB codes: 3fwh(A), 3g9x(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 4kaj(A).

 

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