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EBI
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Ligand clusters for UniProt code P0A3G3
Ligand clusters for P0A3G3: Haloalkane dehalogenase from Rhodococcus sp.
Top 6 (of 13) ligand clusters
Cluster 1.
8 ligand types
15 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
3 ligand types
3 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
2 ligands
Cluster 6.
1 ligand type
1 ligand
Representative protein: 4kajA
Structures
PDB
Schematic diagram
4kaj
A
3g9x
A
4kaf
A
3fwh
A
5y2x
A
more ...
Cluster 1 contains 8 ligand types
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Ligand
Description
1. Ligand:
IPA × 2
isopropyl alcohol
Isopropyl alcohol
PDB codes:
3fwh
(A),
3g9x
(A).
_Cl
2. Metal:
_CL × 5
PDB codes:
3fwh
(A),
3g9x
(A),
4hzg
(A),
5y2x
(A),
5y2y
(A).
3. Ligand:
1Q9 × 2
N-(2-Ethoxy-3,5-Dimethylbenzyl)-1h-Tetrazol-5-Amine
PDB codes:
4kac
(A),
4kaj
(A).
4. Ligand:
OEH × 2
[9-[2-Carboxy-5-[2-[2-(6-Chloranylhexoxy) ethoxy]ethylcarbamoyl]phenyl]-6-(Dimethylamino) xanthen-
3-Ylidene]-Dimethyl-Azanium
PDB codes:
6y7a
(A),
6zcc
(A).
5. Ligand:
8LL × 1
5-(Dimethylamino)-~{N}-[2-(2-Hexoxyethoxy) ethyl]naphthalene-1-Sulfonamide
PDB code:
5y2y
(A).
6. Ligand:
ACT × 1
Acetate ion
PDB code:
6zcc
(A).
7. Ligand:
OEK × 1
4-[2-[2-(6-Chloranylhexoxy)ethoxy]ethylcarbamoyl]-2-[3- (Dimethylamino)-6-(Dimethyl-L^{4}-
Azanylidene)-10,10- Dimethyl-Anthracen-9-Yl]benzoic acid
PDB code:
6y7b
(A).
_Na
8. Metal:
_NA × 1
PDB code:
4kaa
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
8LL × 1
5-(Dimethylamino)-~{N}-[2-(2-Hexoxyethoxy) ethyl]naphthalene-1-Sulfonamide
PDB code:
5y2y
(A).
Cluster 3 contains 3 ligand types
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
6y7a
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4kaj
(A).
_Na
3. Metal:
_NA × 1
PDB code:
4kaj
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
4kaj
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
ACT × 2
Acetate ion
PDB codes:
3fwh
(A),
3g9x
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
4kaj
(A).