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Ligand clusters for UniProt code P0A108
Ligand clusters for P0A108: 1,2-dihydroxynaphthalene dioxygenase OS=Pseudomonas sp. (strain C18) GN=doxG PE=1 SV=1
Top 6 (of 8) ligand clusters
Cluster 1.
6 ligand types
13 ligands
Cluster 2.
3 ligand types
3 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
2 ligand types
5 ligands
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 2ehzA
Structures
PDB
Schematic diagram
2ehz
A
2ei3
A
2ei2
A
2ei1
A
2ei0
A
Cluster 1 contains 6 ligand types
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Ligand
Description
Fe2
1. Metal:
FE2 × 5
PDB codes:
2ehz
(A),
2ei0
(A),
2ei1
(A),
2ei2
(A),
2ei3
(A).
2. Ligand:
BP7 × 2
1,1'-Biphenyl-3,4-Diol
PDB codes:
2ei0
(A),
3. Ligand:
GOL × 2
Glycerol
PDB codes:
2ei2
(A),
2ei3
(A).
4. Ligand:
MCT × 2
4-Methylcatechol
PDB codes:
2ehz
(A),
5. Ligand:
BPY × 1
Biphenyl-2,3-Diol
PDB code:
2ei3
(A).
6. Ligand:
D1N × 1
Naphthalene-1,2-Diol
PDB code:
2ei1
(A).
Cluster 2 contains 3 ligand types
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Ligand
Description
1. Ligand:
BP7 × 1
1,1'-Biphenyl-3,4-Diol
PDB code:
2ei0
(A).
2. Ligand:
BPY × 1
Biphenyl-2,3-Diol
PDB code:
2ei3
(A).
3. Ligand:
MCT × 1
4-Methylcatechol
PDB code:
2ehz
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
BPY × 1
Biphenyl-2,3-Diol
PDB code:
2ei3
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 4
Glycerol
PDB codes:
2ei0
(A),
2ei1
(A),
2ei2
(A),
2ei3
(A).
2. Ligand:
EDO × 1
1,2-Ethanediol
PDB code:
2ehz
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
MCT × 1
4-Methylcatechol
PDB code:
2ehz
(A).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
MCT × 1
4-Methylcatechol
PDB code:
2ehz
(A).