Ligand clusters for UniProt code P09382

Ligand clusters for P09382: Galectin-1 from Homo sapiens

		Top 6 (of 12) ligand clusters Cluster 1. 22 ligand types 29 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 2 ligand types 4 ligands Cluster 4. 2 ligand types 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 9 ligands
Representative protein: 6m5yA

Structures

PDB		Schematic diagram
6m5yA
1w6mA
1w6nA
1w6oA
1w6pA
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Cluster 1 contains 22 ligand types (of which only 20 are listed. Click for all)

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Ligand		Description
		1. Ligand: GOL × 2 glycerin Glycerol PDB codes: 3w58(A), 3w59(A).
		2. Ligand: GAL × 1 galactose Beta-D-Galactopyranose PDB code: 1w6m(A).
		3. Ligand: BGC-GAL × 4 BGC=Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB codes: 1gzw(A), 1w6o(A), 2zkn(A), 6m5y(A).
		4. Ligand: 6S2-GAL × 2 6S2=Methyl 2-Acetamido-2-Deoxy-6-O-Sulfo-Beta-D- Glucopyranoside, GAL=Beta-D-Galactopyranose. PDB codes: 4y1x(A), 4y1y(A).
		5. Ligand: MAG-GAL × 2 MAG=Methyl 2-Acetamido-2-Deoxy-Beta-D-Glucopyranoside, GAL=Beta-D-Galactopyranose. PDB codes: 4y1u(B), 4y1v(A).
		6. Ligand: NDG-GAL × 2 NDG=2-Acetamido-2-Deoxy-Alpha-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB codes: 1w6p(A), 4q26(A).
		7. Ligand: 2XT × 1 Propyl 2-(Acetylamino)-4-O-{3-O-[(1-Benzyl-1h-1,2,3- Triazol-4-Yl)methyl]-Beta-D-Galactopyranosyl}- 2-Deoxy- Beta-D-Glucopyranoside PDB code: 4q1p(A).
		8. Ligand: 2XU × 1 Propyl 2-(Acetylamino)-2-Deoxy-4-O-[3-O-({1-[2-(3- Hydroxyphenyl)-2-Oxoethyl]-1h-1,2,3-Triazol-4- Yl}methyl)-Beta-D-Galactopyranosyl]-Beta-D- Glucopyranoside PDB code: 4q1r(A).
		9. Ligand: 2XW × 1 Prop-2-En-1-Yl 2-(Acetylamino)-4-O-(3-O-{[1-(5-Amino- 1h-1,2,4-Triazol-3-Yl)-1h-1,2,3-Triazol-4- Yl]methyl}- Beta-D-Galactopyranosyl)-2-Deoxy-Beta-D- Glucopyranoside PDB code: 4q2f(A).
		10. Ligand: 5KT × 1 3-Deoxy-3-[4-(Thiophen-3-Yl)-1h-1,2,3-Triazol-1-Yl]- Beta-D-Galactopyranosyl 3-Deoxy-1-Thio-3-[4- (Thiophen- 3-Yl)-1h-1,2,3-Triazol-1-Yl]-Beta-D-Galactopyranoside PDB code: 6f83(A).
		11. Ligand: 6C2-GAL × 1 6C2=Methyl 2-Acetamido-2-Deoxy-Beta-D-Glucopyranosiduronic acid, GAL=Beta-D-Galactopyranose. PDB code: 4y1z(A).
		12. Ligand: FRU-GAL × 1 FRU=Beta-D-Fructofuranose, GAL=Beta-D-Galactopyranose. PDB code: 6b94(A).
		13. Ligand: GCO-GAL × 1 GCO=D-Gluconic acid, GAL=Beta-D-Galactopyranose. PDB code: 3oy8(A).
		14. Ligand: GLC-GAL-SIA × 1 GLC=Alpha-D-Glucopyranose, GAL=Beta-D-Galactopyranose, SIA=N-Acetyl-Alpha-Neuraminic acid. PDB code: 4y20(A).
		15. Ligand: JB9 × 1 ~{N}-[(2~{r},3~{r},4~{r},5~{s},6~{r})-5-[(2~{s},3~{r}, 4~{s},5~{s},6~{r})-4-[[1-[[3-[(~{Z})-3- [Bis(azanyl) methylideneamino]prop-1-Enyl]phenyl]methyl]-1,2,3- Triazol-4-Yl]methoxy]-6- (Hydroxymethyl)-3,5- Bis(oxidanyl)oxan-2-Yl]oxy-6-(Hydroxymethyl)-4- Oxidanyl-2-Prop-2-Enoxy-Oxan- 3-Yl]ethanamide PDB code: 5mwt(A).
		16. Ligand: MAG-SGA × 1 MAG=Methyl 2-Acetamido-2-Deoxy-Beta-D-Glucopyranoside, SGA=3-O-Sulfo-Beta-D-Galactopyranose. PDB code: 4y22(B).
		17. Ligand: MQT × 1 Methyl 2-O-Acetyl-3-O-(4-Methylbenzoyl)-Beta-D- Talopyranoside PDB code: 3t2t(A).
		18. Ligand: NAG-GAL × 1 NAG=2-Acetamido-2-Deoxy-Beta-D-Glucopyranose, GAL=Beta-D-Galactopyranose. PDB code: 4xbl(A).
		19. Ligand: TD2 × 1 3-Deoxy-3-[4-(3-Fluorophenyl)-1h-1,2,3-Triazol-1-Yl]- Beta-D-Galactopyranosyl 3-Deoxy-3-[4-(3- Fluorophenyl)- 1h-1,2,3-Triazol-1-Yl]-1-Thio-Beta-D-Galactopyranoside PDB code: 4y24(A).
		20. Ligand: TVS-TVV × 1 TVS=Prop-2-En-1-Yl 2-(Acetylamino)-2-Deoxy-Beta-D- Glucopyranoside, TVV=3-O-Prop-2-Yn-1-Yl-Beta-D-Galactopyranose. PDB code: 4q27(A).
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Cluster 2 contains 1 ligand type

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Ligand		Description
		1. Ligand: GLC-GAL × 1 GAL=Beta-D-Galactopyranose, GLC=Alpha-D-Glucopyranose. PDB code: 6m5y(A).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3w58(A).
		2. Ligand: SO4 × 3 Sulfate ion PDB codes: 1gzw(A), 1w6m(A), 1w6n(A).

Cluster 4 contains 2 ligand types

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Ligand		Description
		1. Ligand: GOL × 1 glycerin Glycerol PDB code: 3w59(A).
		2. Ligand: SO4 × 1 Sulfate ion PDB code: 1w6m(A).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SO4 × 1 Sulfate ion PDB code: 3w59(A).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: BME × 9 Beta-Mercaptoethanol PDB codes: 1gzw(A), 1w6m(A), 1w6n(A), 1w6o(A), 1w6p(A), 1w6q(A), 3w58(A), 3w59(A), 6b94(A).