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Ligand clusters for UniProt code P08037

Ligand clusters for P08037: Beta-1,4-galactosyltransferase 1 OS=Bos taurus OX=9913 GN=B4GALT1 PE=1 SV=3

Top 6 (of 14) ligand clusters
Cluster 1.
18 ligand types
43 ligands
Cluster 2.
2 ligand types
5 ligands
Cluster 3.
3 ligand types
4 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
2 ligand types
8 ligands
Representative protein: 1fgxA  
JSmol
 

Structures

PDB   Schematic diagram
1fgxA    
1pztA    
2fydB    
1tw5A    
1fr8A    
 more ...

 

 Cluster 1 contains 18 ligand types

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Ligand Description


 
1. Ligand: GDU × 6
Galactose-Uridine-5'-Diphosphate
PDB codes: 1fr8(A), 1o0r(A), 1tvy(A), 1tw1(A), 1yro(B), 2fyc(B).


 
2. Ligand: UDP × 3
Uridine-5'-Diphosphate
PDB codes: 1nhe(B), 1nkh(B), 1pzy(B).

_Mn
 
3. Metal: _MN × 10
PDB codes: 1nkh(B), 1o0r(A), 1o23(B), 1oqm(B), 1pzy(B), 1tvy(A), 1tw5(A), 1yro(B), 2fyd(B), 4krv(A).


 
4. Ligand: NAG × 3
n-acetylglucosamine
N-Acetyl-D-Glucosamine
PDB codes: 1nmm(B), 1nqi(B), 1pzy(B).

_Mg
 
5. Metal: _MG × 1
PDB code: 1tw1(A).


 
6. Ligand: BGN × 1
N-Butanoyl-2-Amino-2-Deoxy-Glucopyranoside
PDB code: 1nwg(B).


 
7. Ligand: UD2 × 1
Uridine-Diphosphate-N-Acetylgalactosamine
PDB code: 1oqm(B).


 
8. Ligand: UDH × 1
6-Aminohexyl-Uridine-C1,5'-Diphosphate
PDB code: 1tw5(A).


 
9. Ligand: CBS × 1
Di(n-Acetyl-D-Glucosamine)
PDB code: 1tw5(A).


 
10. Ligand: PG4 × 7
Tetraethylene glycol
PDB codes: 1nf5(B), 1nhe(B), 1nkh(B), 1o23(B), 1yro(B), 2fyd(B).


 
11. Ligand: UDP × 1
Uridine-5'-Diphosphate
PDB code: 2fyd(B).


 
12. Ligand: BGC × 2
Beta-D-Glucose
PDB codes: 1nf5(B), 2fyd(B).


 
13. Ligand: UDH × 1
6-Aminohexyl-Uridine-C1,5'-Diphosphate
PDB code: 4krv(A).


 
14. Ligand: NGA × 1
N-Acetyl-D-Galactosamine
PDB code: 2fyd(B).


 
15. Ligand: NGS × 1
2-(Acetylamino)-2-Deoxy-6-O-Sulfo-Beta-D-Glucopyranose
PDB code: 4krv(A).


 
16. Ligand: SO4 × 1
Sulfate ion
PDB code: 4krv(A).


 
17. Ligand: UPG × 1
Uridine-5'-Diphosphate-Glucose
PDB code: 1o23(B).

_Ca
 
18. Metal: _CA × 1
PDB code: 2fyc(B).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: UDP × 4
Uridine-5'-Diphosphate
PDB codes: 1nkh(B), 1o23(B), 1yro(B), 2fyc(B).


 
2. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 1o0r(A).

 

 Cluster 3 contains 3 ligand types

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Ligand Description


 
1. Ligand: DIO × 1
1,4-Diethylene dioxide
PDB code: 1tw1(A).


 
2. Ligand: MES × 1
2-(N-Morpholino)-Ethanesulfonic acid
PDB code: 1tvy(A).


 
3. Ligand: SO4 × 2
Sulfate ion
PDB codes: 1tw5(A), 4krv(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: U5P × 1
Uridine-5'-Monophosphate
PDB code: 1fgx(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: PG4 × 1
Tetraethylene glycol
PDB code: 1nkh(B).

 

 Cluster 6 contains 2 ligand types

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Ligand Description


 
1. Ligand: PG4 × 2
Tetraethylene glycol
PDB codes: 1nf5(B), 1oqm(B).


 
2. Ligand: SO4 × 6
Sulfate ion
PDB codes: 1o0r(A), 1pzt(A), 1tvy(A), 1tw1(A), 1tw5(A), 4krv(A).

 

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