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EBI
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PDBsum
Ligand clusters for UniProt code P06745
Ligand clusters for P06745: Glucose-6-phosphate isomerase OS=Mus musculus GN=Gpi PE=1 SV=4
Top 6 (of 23) ligand clusters
Cluster 1.
11 ligand types
13 ligands
Cluster 2.
7 ligand types
8 ligands
Cluster 3.
2 ligand types
12 ligands
Cluster 4.
2 ligand types
4 ligands
Cluster 5.
2 ligand types
3 ligands
Cluster 6.
2 ligand types
2 ligands
Representative protein: 2cvpA
Structures
PDB
Schematic diagram
2cvp
A
2cxn
A
2cxu
A
2cxp
A
1u0f
A
more ...
Cluster 1 contains 11 ligand types
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Ligand
Description
1. Ligand:
F6P × 2
Fructose-6-Phosphate
PDB codes:
2cxs
(A),
2cxt
(A).
2. Ligand:
G6P × 1
Alpha-D-Glucose-6-Phosphate
PDB code:
1u0f
(A).
3. Ligand:
S6P × 1
D-Sorbitol-6-Phosphate
PDB code:
2cxq
(A).
4. Ligand:
ACT × 1
acetic acid
Acetate ion
PDB code:
2cvp
(A).
5. Ligand:
6PG × 1
6-Phosphogluconic acid
PDB code:
2cxr
(A).
6. Ligand:
A5P × 1
Arabinose-5-Phosphate
PDB code:
2cxp
(A).
7. Ligand:
G6Q × 1
Glucose-6-Phosphate
PDB code:
1u0f
(A).
8. Ligand:
DER × 1
D-4-Phosphoerythronic acid
PDB code:
2cxo
(A).
9. Ligand:
E4P × 1
Erythose-4-Phosphate
PDB code:
1u0g
(A).
10. Ligand:
PO4 × 2
Phosphate ion
PDB codes:
2cxn
(A),
2cxu
(A).
11. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1u0e
(A).
Cluster 2 contains 7 ligand types
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Ligand
Description
1. Ligand:
F6P × 2
Fructose-6-Phosphate
PDB codes:
2cxs
(A),
2cxt
(A).
2. Ligand:
S6P × 1
D-Sorbitol-6-Phosphate
PDB code:
2cxq
(A).
3. Ligand:
6PG × 1
6-Phosphogluconic acid
PDB code:
2cxr
(A).
4. Ligand:
A5P × 1
Arabinose-5-Phosphate
PDB code:
2cxp
(A).
5. Ligand:
DER × 1
D-4-Phosphoerythronic acid
PDB code:
2cxo
(A).
6. Ligand:
E4P × 1
Erythose-4-Phosphate
PDB code:
1u0g
(A).
7. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1u0f
(A).
Cluster 3 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 9
Glycerol
PDB codes:
2cvp
(A),
2cxn
(A),
2cxo
(A),
2cxp
(A),
2cxq
(A),
2cxr
(A),
2cxs
(A),
2cxt
(A),
2cxu
(A).
2. Ligand:
BME × 3
Beta-Mercaptoethanol
PDB codes:
1u0e
(A),
1u0f
(A),
1u0g
(A).
Cluster 4 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
Glycerol
PDB codes:
1u0e
(A),
1u0f
(A).
2. Ligand:
BME × 2
Beta-Mercaptoethanol
PDB codes:
1u0e
(A),
1u0g
(A).
Cluster 5 contains 2 ligand types
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Ligand
Description
1. Ligand:
GOL × 2
Glycerol
PDB codes:
1u0f
(A),
1u0g
(A).
2. Ligand:
BME × 1
Beta-Mercaptoethanol
PDB code:
1u0e
(A).
Cluster 6 contains 2 ligand types
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Ligand
Description
1. Ligand:
BME × 1
Beta-Mercaptoethanol
PDB code:
1u0e
(A).
2. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1u0f
(A).