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Ligand clusters for UniProt code P05798
Ligand clusters for P05798: Guanyl-specific ribonuclease Sa OS=Streptomyces aureofaciens GN=rnaSA PE=1 SV=2
6 ligand clusters
Cluster 1.
5 ligand types
14 ligands
Cluster 2.
1 ligand type
2 ligands
Cluster 3.
1 ligand type
21 ligands
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 1gmpA
Structures
PDB
Schematic diagram
1gmp
A
1rgf
A
1gmr
A
1rge
A
1i8v
A
more ...
Cluster 1 contains 5 ligand types
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Ligand
Description
1. Ligand:
SO4 × 8
Sulfate ion
PDB codes:
1i8v
(A),
1rgf
(A),
1rgg
(A),
1rgh
(A),
1ynv
(X),
1zgx
(A),
4j5g
(A).
2. Ligand:
2GP × 3
Guanosine-2'-Monophosphate
PDB codes:
1gmp
(A),
1gmr
(A),
1rge
(A).
3. Ligand:
3GP × 1
Guanosine-3'-Monophosphate
PDB code:
2sar
(A).
4. Ligand:
GOL × 1
Glycerol
PDB code:
1lni
(A).
5. Ligand:
SGP × 1
Guanosine-2',3'-Cyclophosphorothioate
PDB code:
1rsn
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 2
Glycerol
PDB codes:
1lni
(A),
4j5k
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 21
Sulfate ion
PDB codes:
1gmp
(A),
1gmq
(A),
1gmr
(A),
1i70
(A),
1i8v
(A),
1lni
(A),
1rge
(A),
1rgf
(A),
1rgg
(A),
1rgh
(A),
1rsn
(A),
1sar
(A),
1t2h
(A),
1uci
(A),
1ucj
(A),
1uck
(A),
1ucl
(A),
2sar
(A),
4gho
(A),
4j5g
(A),
4j5k
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1zgx
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
1zgx
(B).
Cluster 6 contains 1 ligand type
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Ligand
Description
1. Ligand:
SO4 × 1
Sulfate ion
PDB code:
4j5g
(A).