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EBI
Databases
Structure Databases
PDBsum
Ligand clusters for UniProt code P04517
Ligand clusters for P04517: Genome polyprotein OS=Tobacco etch virus OX=12227 PE=1 SV=1
5 ligand clusters
Cluster 1.
2 ligand types
2 ligands
Cluster 2.
1 ligand type
1 ligand
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Representative protein: 1lvmA
Structures
PDB
Schematic diagram
1lvm
A
1lvb
A
1q31
A
Cluster 1 contains 2 ligand types
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Ligand
Description
1. Ligand:
ACE-GLU-ASN-LEU-TYR-PHE-GLN × 1
ACE
=Acetyl group.
PDB code:
1lvm
(A).
2. Ligand:
THR-GLU-ASN-LEU-TYR-PHE-GLN-SER-GLY-THR × 1
PDB code:
1lvb
(A).
Cluster 2 contains 1 ligand type
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Ligand
Description
1. Ligand:
GLU-ALA-THR-GLN-LEU-MET-ASN × 1
PDB code:
1lvm
(A).
Cluster 3 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1lvb
(A).
Cluster 4 contains 1 ligand type
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Ligand
Description
1. Ligand:
GOL × 1
glycerin
Glycerol
PDB code:
1lvb
(A).
Cluster 5 contains 1 ligand type
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Ligand
Description
1. Ligand:
BME × 1
Beta-Mercaptoethanol
PDB code:
1q31
(A).