Ligand clusters for UniProt code P04406

Ligand clusters for P04406: Glyceraldehyde-3-phosphate dehydrogenase from Homo sapiens

		Top 6 (of 13) ligand clusters Cluster 1. 5 ligand types 9 ligands Cluster 2. 1 ligand type 1 ligand Cluster 3. 2 ligand types 3 ligands Cluster 4. 1 ligand type 1 ligand Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 6m61O

Structures

PDB		Schematic diagram
6m61O
6ynhB
2fehO
4wniO
1znqO
		more ...

Cluster 1 contains 5 ligand types

Use checkboxes to select ligands to display in RasMol, Jmol, or download as an SDF file. Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: NAD × 2 Nicotinamide-Adenine-Dinucleotide PDB codes: 1znq(O), 3gpd(R).
		2. Ligand: SO4 × 2 Sulfate ion PDB codes: 3gpd(R),
		3. Ligand: NAD × 3 Nicotinamide-Adenine-Dinucleotide PDB codes: 4wni(O), 6ade(A), 6m61(O).
		4. Ligand: AW9 × 1 (2z)-4-Methoxy-4-Oxobut-2-Enoic acid PDB code: 6iq6(A).
		5. Ligand: F4F × 1 (5as,6r,9s,9as)-9-Methyl-9-Oxidanyl-1-Oxidanylidene-6- Propan-2-Yl-3,5a,6,7,8,9a-Hexahydro-2- Benzoxepine-4- Carboxylic acid PDB code: 6m61(O).

Cluster 2 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: DB0-DB0 × 1 DB0=N-(Dibenzo[b,F]oxepin-10-Ylmethyl)-N-Methyl-N-Prop-2- Ynylamine. PDB code: 2feh(O).

Cluster 3 contains 2 ligand types

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: XPE × 2 3,6,9,12,15,18,21,24,27-Nonaoxanonacosane-1,29-Diol PDB codes: 6yne(A), 6ynh(B).
		2. Ligand: PEG × 1 Di(hydroxyethyl)ether PDB code: 6m61(O).

Cluster 4 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: XPE × 1 3,6,9,12,15,18,21,24,27-Nonaoxanonacosane-1,29-Diol PDB code: 6yne(A).

Cluster 5 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: XPE × 1 3,6,9,12,15,18,21,24,27-Nonaoxanonacosane-1,29-Diol PDB code: 6yne(A).

Cluster 6 contains 1 ligand type

Selection shortcuts: select all/none invert selection.
Ligand		Description
		1. Ligand: XPE × 1 3,6,9,12,15,18,21,24,27-Nonaoxanonacosane-1,29-Diol PDB code: 6yne(A).