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Ligand clusters for UniProt code P04252

Ligand clusters for P04252: Bacterial hemoglobin OS=Vitreoscilla stercoraria GN=vhb PE=1 SV=1

Top 6 (of 9) ligand clusters
Cluster 1.
4 ligand types
7 ligands
Cluster 2.
2 ligand types
2 ligands
Cluster 3.
1 ligand type
1 ligand
Cluster 4.
1 ligand type
1 ligand
Cluster 5.
1 ligand type
1 ligand
Cluster 6.
1 ligand type
1 ligand
Representative protein: 3tm9A  
JSmol
 

Structures

PDB   Schematic diagram
3tm9A    
3tm3A    
3tldA    
1vhbA    
4vhbA    
 more ...

 

 Cluster 1 contains 4 ligand types

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Ligand Description


 
1. Ligand: HEM × 4
Protoporphyrin IX containing fe
PDB codes: 1vhb(A), 3tld(A), 3tm3(A), 3tm9(A).


 
2. Ligand: AZI-HEM × 1
AZI=Azide ion, HEM=Protoporphyrin IX containing fe.
PDB code: 2vhb(A).


 
3. Ligand: HEM-IMD × 1
HEM=Protoporphyrin IX containing fe, IMD=Imidazole.
PDB code: 3vhb(A).


 
4. Ligand: SCN-HEM × 1
SCN=Thiocyanate ion, HEM=Protoporphyrin IX containing fe.
PDB code: 4vhb(A).

 

 Cluster 2 contains 2 ligand types

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3tm9(A).


 
2. Ligand: GOL × 1
Glycerol
PDB code: 3tld(A).

 

 Cluster 3 contains 1 ligand type

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Ligand Description


 
1. Ligand: GOL × 1
Glycerol
PDB code: 3tld(A).

 

 Cluster 4 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3tm9(A).

 

 Cluster 5 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3tm9(A).

 

 Cluster 6 contains 1 ligand type

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Ligand Description


 
1. Ligand: EDO × 1
1,2-Ethanediol
PDB code: 3tm9(A).

 

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