Ligand clusters for UniProt code P04038

Ligand clusters for P04038: Cytochrome c oxidase subunit 6C from Bos taurus

		Top 6 (of 9) ligand clusters Cluster 1. 2 ligand types 42 ligands Cluster 2. 3 ligand types 44 ligands Cluster 3. 2 ligand types 39 ligands Cluster 4. 1 ligand type 2 ligands Cluster 5. 1 ligand type 1 ligand Cluster 6. 1 ligand type 1 ligand
Representative protein: 1v54I

Structures

PDB		Schematic diagram
1v54I
2eilI
2dysI
2eimI
2einI
		more ...

Cluster 1 contains 2 ligand types

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Ligand		Description
		1. Ligand: TGL × 39 Tristearoylglycerol PDB codes: 1v54(I), 1v55(I), 2dyr(I), 2dys(I), 2eij(I), 2eik(I), 2eil(I), 2eim(I), 2ein(I), 2zxw(I), 3abk(I), 3ag1(I), 3ag2(I), 3ag3(I), 3ag4(I), 3asn(I), 3aso(I), 3wg7(I), 3x2q(I), 5b1a(I), 5b1b(I), 5b3s(I), 5iy5(I), 5w97(I), 5wau(I), 5x19(I), 5xdq(I), 5xdx(I), 5z84(I), 5z85(I), 5z86(I), 5zco(I), 5zcp(I), 5zcq(I), 6j8m(I), 6juw(I), 6nkn(I), 6nmf(I), 6nmp(I).
		2. Ligand: CDL × 3 Cardiolipin PDB codes: 6jy3(I), 6jy4(I), 7coh(I).

Cluster 2 contains 3 ligand types

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Ligand		Description
		1. Ligand: PSC × 42 (7r,17e,20e)-4-Hydroxy-N,N,N-Trimethyl-9-Oxo-7- [(Palmitoyloxy)methyl]-3,5,8-Trioxa-4- Phosphahexacosa- 17,20-Dien-1-Aminium 4-Oxide PDB codes: 1v54(I), 1v55(I), 2dyr(I), 2dys(I), 2eij(I), 2eik(I), 2eil(I), 2eim(I), 2ein(I), 2zxw(I), 3abk(I), 3abl(I), 3abm(I), 3ag1(I), 3ag2(I), 3ag3(I), 3ag4(I), 3asn(I), 3aso(I), 3wg7(I), 3x2q(I), 5b1a(I), 5b1b(I), 5b3s(I), 5w97(I), 5wau(I), 5x19(I), 5x1b(I), 5x1f(I), 5xdq(I), 5xdx(I), 5z84(I), 5z85(I), 5z86(I), 5zco(I), 5zcp(I), 5zcq(I), 6j8m(I), 6juw(I), 6nkn(I), 6nmf(I), 6nmp(I).
		2. Ligand: CQX × 1 (2s,3s,4s,5s,6r)-2-(2-Decoxyethoxy)-6-(Hydroxymethyl) oxane-3,4,5-Triol PDB code: 6jy4(I).
		3. Ligand: DMU × 1 Decyl-Beta-D-Maltopyranoside PDB code: 7coh(I).

Cluster 3 contains 2 ligand types

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Ligand		Description
		1. Ligand: TGL × 38 Tristearoylglycerol PDB codes: 1v54(I), 2dyr(I), 2dys(I), 2eij(I), 2eil(I), 2eim(I), 2ein(I), 2zxw(I), 3abk(I), 3abl(I), 3abm(I), 3ag1(I), 3ag2(I), 3ag3(I), 3ag4(I), 3wg7(I), 3x2q(I), 5b1a(I), 5b1b(I), 5b3s(I), 5iy5(I), 5w97(I), 5wau(I), 5x19(I), 5x1b(I), 5x1f(I), 5xdq(I), 5xdx(I), 5z84(I), 5z85(I), 5z86(I), 5zco(I), 5zcp(I), 5zcq(I), 6j8m(I), 6juw(I), 6nmf(I), 6nmp(I).
		2. Ligand: EDO × 1 1,2-Ethanediol PDB code: 5b3s(I).

Cluster 4 contains 1 ligand type

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Ligand		Description
		1. Ligand: CQX × 2 (2s,3s,4s,5s,6r)-2-(2-Decoxyethoxy)-6-(Hydroxymethyl) oxane-3,4,5-Triol PDB codes: 6jy3(I), 6jy4(I).

Cluster 5 contains 1 ligand type

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Ligand		Description
		1. Ligand: SAC × 1 N-Acetyl-Serine PDB code: 5wau(I).

Cluster 6 contains 1 ligand type

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Ligand		Description
		1. Ligand: EDO × 1 1,2-Ethanediol PDB code: 5b3s(I).